Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 AC073621.1-201ENST00000392730 636 ntBASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 PTCHD3P3-201ENST00000403073 906 ntBASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 AL160237.2-201ENST00000556165 472 ntBASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 AC012640.2-201ENST00000561606 901 ntBASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 NKILA-202ENST00000614771 2598 ntBASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PTPN20Q4JDL3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 AF186996.4-201ENST00000467186 377 ntBASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 TERC-201ENST00000602385 541 ntBASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 AC008735.5-201ENST00000623544 497 ntBASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 AC011676.5-201ENST00000624864 2660 ntBASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTPN20Q4JDL3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 MRPL3P1-201ENST00000400109 1033 ntBASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 PAWRP1-201ENST00000451083 565 ntBASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 FAM215A-202ENST00000632077 792 ntBASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 AL805961.1-202ENST00000641562 540 ntBASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTPN20Q4JDL3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN20Q4JDL3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN20Q4JDL3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.02■□□□□ 0.47
PTPN20Q4JDL3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN20Q4JDL3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN20Q4JDL3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN20Q4JDL3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN20Q4JDL3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.02■□□□□ 0.47
PTPN20Q4JDL3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTPN20Q4JDL3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN20Q4JDL3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms