Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2B3Q16720 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2B3Q16720 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2B3Q16720 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2B3Q16720 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2B3Q16720 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2B3Q16720 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 ACTL9-202ENST00000612068 1252 ntBASIC20.98■□□□□ 0.95
ATP2B3Q16720 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.98■□□□□ 0.95
ATP2B3Q16720 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2B3Q16720 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2B3Q16720 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
ATP2B3Q16720 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ATP2B3Q16720 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ATP2B3Q16720 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ATP2B3Q16720 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2B3Q16720 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ATP2B3Q16720 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2B3Q16720 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2B3Q16720 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2B3Q16720 AC116353.5-201ENST00000638148 1699 ntBASIC20.97■□□□□ 0.95
ATP2B3Q16720 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2B3Q16720 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP2B3Q16720 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2B3Q16720 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP2B3Q16720 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP2B3Q16720 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP2B3Q16720 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.97■□□□□ 0.95
ATP2B3Q16720 PDPK2P-202ENST00000562415 1191 ntBASIC20.97■□□□□ 0.95
ATP2B3Q16720 MIR3687-2-201ENST00000577708 61 ntBASIC20.97■□□□□ 0.95
ATP2B3Q16720 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2B3Q16720 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2B3Q16720 MIR3687-1-201ENST00000614492 61 ntBASIC20.97■□□□□ 0.95
ATP2B3Q16720 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2B3Q16720 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2B3Q16720 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2B3Q16720 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2B3Q16720 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ATP2B3Q16720 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ATP2B3Q16720 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP2B3Q16720 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2B3Q16720 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP2B3Q16720 AC025580.3-201ENST00000617932 1424 ntBASIC20.96■□□□□ 0.95
ATP2B3Q16720 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2B3Q16720 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ATP2B3Q16720 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2B3Q16720 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2B3Q16720 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP2B3Q16720 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ATP2B3Q16720 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ATP2B3Q16720 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2B3Q16720 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP2B3Q16720 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP2B3Q16720 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP2B3Q16720 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
ATP2B3Q16720 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP2B3Q16720 AC107918.2-201ENST00000530817 355 ntBASIC20.96■□□□□ 0.95
ATP2B3Q16720 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.96■□□□□ 0.95
ATP2B3Q16720 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.96■□□□□ 0.95
ATP2B3Q16720 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2B3Q16720 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2B3Q16720 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ATP2B3Q16720 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2B3Q16720 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP2B3Q16720 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ATP2B3Q16720 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ATP2B3Q16720 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP2B3Q16720 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2B3Q16720 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2B3Q16720 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP2B3Q16720 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP2B3Q16720 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2B3Q16720 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2B3Q16720 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.95■□□□□ 0.94
ATP2B3Q16720 ALG1L5P-201ENST00000482043 771 ntBASIC20.95■□□□□ 0.94
ATP2B3Q16720 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP2B3Q16720 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP2B3Q16720 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP2B3Q16720 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ATP2B3Q16720 AC023141.13-201ENST00000604991 943 ntBASIC20.95■□□□□ 0.94
ATP2B3Q16720 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP2B3Q16720 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2B3Q16720 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP2B3Q16720 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
ATP2B3Q16720 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.95■□□□□ 0.94
ATP2B3Q16720 AC129492.6-201ENST00000611383 1305 ntBASIC20.95■□□□□ 0.94
ATP2B3Q16720 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms