Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDR1Q08345 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
DDR1Q08345 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDR1Q08345 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDR1Q08345 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDR1Q08345 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDR1Q08345 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.09■□□□□ 0.97
DDR1Q08345 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.09■□□□□ 0.97
DDR1Q08345 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.09■□□□□ 0.97
DDR1Q08345 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDR1Q08345 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.09■□□□□ 0.97
DDR1Q08345 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21.09■□□□□ 0.97
DDR1Q08345 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.09■□□□□ 0.97
DDR1Q08345 HLA-V-204ENST00000476601 1289 ntBASIC21.09■□□□□ 0.97
DDR1Q08345 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.09■□□□□ 0.97
DDR1Q08345 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDR1Q08345 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.09■□□□□ 0.97
DDR1Q08345 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DDR1Q08345 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.09■□□□□ 0.97
DDR1Q08345 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDR1Q08345 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
DDR1Q08345 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDR1Q08345 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
DDR1Q08345 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDR1Q08345 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDR1Q08345 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDR1Q08345 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
DDR1Q08345 FOXO1B-201ENST00000504678 1527 ntBASIC21.09■□□□□ 0.97
DDR1Q08345 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC21.09■□□□□ 0.97
DDR1Q08345 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.08■□□□□ 0.97
DDR1Q08345 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDR1Q08345 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
DDR1Q08345 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDR1Q08345 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDR1Q08345 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC21.08■□□□□ 0.97
DDR1Q08345 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DDR1Q08345 API5-211ENST00000534695 560 ntTSL 5 BASIC21.08■□□□□ 0.97
DDR1Q08345 HILS1-202ENST00000545329 423 ntBASIC21.08■□□□□ 0.97
DDR1Q08345 AL844908.2-201ENST00000609461 460 ntBASIC21.08■□□□□ 0.97
DDR1Q08345 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DDR1Q08345 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DDR1Q08345 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.08■□□□□ 0.96
DDR1Q08345 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
DDR1Q08345 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
DDR1Q08345 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.08■□□□□ 0.96
DDR1Q08345 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
DDR1Q08345 TOP3BP1-201ENST00000420768 1380 ntBASIC21.08■□□□□ 0.96
DDR1Q08345 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.08■□□□□ 0.96
DDR1Q08345 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
DDR1Q08345 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
DDR1Q08345 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
DDR1Q08345 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
DDR1Q08345 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
DDR1Q08345 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
DDR1Q08345 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDR1Q08345 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDR1Q08345 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
DDR1Q08345 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDR1Q08345 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDR1Q08345 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
DDR1Q08345 PTPA-220ENST00000436883 532 ntTSL 4 BASIC21.07■□□□□ 0.96
DDR1Q08345 IGHV3-71-201ENST00000523324 359 ntBASIC21.07■□□□□ 0.96
DDR1Q08345 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC21.07■□□□□ 0.96
DDR1Q08345 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
DDR1Q08345 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDR1Q08345 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.07■□□□□ 0.96
DDR1Q08345 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DDR1Q08345 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DDR1Q08345 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
DDR1Q08345 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDR1Q08345 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
DDR1Q08345 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
DDR1Q08345 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDR1Q08345 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.06■□□□□ 0.96
DDR1Q08345 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
DDR1Q08345 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDR1Q08345 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.06■□□□□ 0.96
DDR1Q08345 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDR1Q08345 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDR1Q08345 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDR1Q08345 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC21.06■□□□□ 0.96
DDR1Q08345 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDR1Q08345 AC105233.2-201ENST00000523697 349 ntBASIC21.06■□□□□ 0.96
DDR1Q08345 AF228730.5-201ENST00000530288 346 ntBASIC21.06■□□□□ 0.96
DDR1Q08345 AC073389.1-201ENST00000595595 795 ntBASIC21.06■□□□□ 0.96
DDR1Q08345 AL132655.2-201ENST00000596276 594 ntBASIC21.06■□□□□ 0.96
DDR1Q08345 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
DDR1Q08345 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
DDR1Q08345 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DDR1Q08345 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
DDR1Q08345 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.06■□□□□ 0.96
DDR1Q08345 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDR1Q08345 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.06■□□□□ 0.96
DDR1Q08345 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDR1Q08345 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DDR1Q08345 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.06■□□□□ 0.96
DDR1Q08345 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DDR1Q08345 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DDR1Q08345 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.05■□□□□ 0.96
DDR1Q08345 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms