Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GABREP78334 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
GABREP78334 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 AL135999.2-201ENST00000622438 1686 ntBASIC16.28■□□□□ 0.2
GABREP78334 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.28■□□□□ 0.2
GABREP78334 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 KLF2P3-201ENST00000451977 1087 ntBASIC16.28■□□□□ 0.2
GABREP78334 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.28■□□□□ 0.2
GABREP78334 AC125807.1-201ENST00000483097 614 ntBASIC16.28■□□□□ 0.2
GABREP78334 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.28■□□□□ 0.2
GABREP78334 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
GABREP78334 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.28■□□□□ 0.2
GABREP78334 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.28■□□□□ 0.2
GABREP78334 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.28■□□□□ 0.2
GABREP78334 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GABREP78334 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 AC012645.4-201ENST00000610691 1061 ntBASIC16.28■□□□□ 0.2
GABREP78334 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.28■□□□□ 0.2
GABREP78334 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 AC046185.3-201ENST00000623228 1824 ntBASIC16.28■□□□□ 0.2
GABREP78334 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.28■□□□□ 0.2
GABREP78334 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.28■□□□□ 0.2
GABREP78334 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABREP78334 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.28■□□□□ 0.2
GABREP78334 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.28■□□□□ 0.2
GABREP78334 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABREP78334 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABREP78334 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABREP78334 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABREP78334 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABREP78334 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.27■□□□□ 0.2
GABREP78334 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.27■□□□□ 0.2
GABREP78334 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABREP78334 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABREP78334 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.27■□□□□ 0.2
GABREP78334 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABREP78334 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABREP78334 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.27■□□□□ 0.2
GABREP78334 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.27■□□□□ 0.2
GABREP78334 AC107890.1-201ENST00000422478 521 ntBASIC16.27■□□□□ 0.2
GABREP78334 AC002472.2-201ENST00000442739 958 ntBASIC16.27■□□□□ 0.2
GABREP78334 TSPY16P-201ENST00000449843 468 ntBASIC16.27■□□□□ 0.2
GABREP78334 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.27■□□□□ 0.2
GABREP78334 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.27■□□□□ 0.2
GABREP78334 AL135744.1-201ENST00000565098 629 ntBASIC16.27■□□□□ 0.2
GABREP78334 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABREP78334 AP001059.3-201ENST00000619053 235 ntBASIC16.27■□□□□ 0.2
GABREP78334 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
GABREP78334 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GABREP78334 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABREP78334 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABREP78334 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABREP78334 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GABREP78334 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
GABREP78334 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABREP78334 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABREP78334 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GABREP78334 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.26■□□□□ 0.19
GABREP78334 OR6D1P-202ENST00000641007 5290 ntBASIC16.26■□□□□ 0.19
GABREP78334 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GABREP78334 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GABREP78334 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.26■□□□□ 0.19
GABREP78334 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GABREP78334 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.26■□□□□ 0.19
GABREP78334 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.26■□□□□ 0.19
GABREP78334 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.26■□□□□ 0.19
GABREP78334 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.26■□□□□ 0.19
GABREP78334 FAM58DP-201ENST00000428076 619 ntBASIC16.26■□□□□ 0.19
GABREP78334 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.26■□□□□ 0.19
GABREP78334 AL512356.2-201ENST00000546955 174 ntBASIC16.26■□□□□ 0.19
GABREP78334 RARRES2P8-201ENST00000566335 367 ntBASIC16.26■□□□□ 0.19
GABREP78334 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.26■□□□□ 0.19
GABREP78334 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.26■□□□□ 0.19
GABREP78334 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABREP78334 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms