Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP46P62068 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
USP46P62068 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP46P62068 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP46P62068 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.03■□□□□ 0.48
USP46P62068 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
USP46P62068 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
USP46P62068 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.03■□□□□ 0.48
USP46P62068 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
USP46P62068 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP46P62068 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
USP46P62068 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
USP46P62068 AC004832.2-201ENST00000426397 482 ntBASIC18.03■□□□□ 0.48
USP46P62068 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
USP46P62068 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.03■□□□□ 0.48
USP46P62068 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.03■□□□□ 0.48
USP46P62068 AC055717.3-201ENST00000622967 595 ntBASIC18.03■□□□□ 0.48
USP46P62068 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.03■□□□□ 0.48
USP46P62068 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
USP46P62068 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.03■□□□□ 0.48
USP46P62068 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP46P62068 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
USP46P62068 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.03■□□□□ 0.48
USP46P62068 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP46P62068 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
USP46P62068 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP46P62068 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
USP46P62068 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP46P62068 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP46P62068 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP46P62068 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP46P62068 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP46P62068 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP46P62068 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
USP46P62068 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
USP46P62068 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
USP46P62068 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP46P62068 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
USP46P62068 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP46P62068 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.02■□□□□ 0.48
USP46P62068 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.02■□□□□ 0.48
USP46P62068 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
USP46P62068 RPSAP43-201ENST00000402237 625 ntBASIC18.02■□□□□ 0.48
USP46P62068 MIR1233-2-201ENST00000408138 82 ntBASIC18.02■□□□□ 0.48
USP46P62068 MIR1233-1-201ENST00000408722 82 ntBASIC18.02■□□□□ 0.48
USP46P62068 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.02■□□□□ 0.48
USP46P62068 GPX1P2-201ENST00000429271 606 ntBASIC18.02■□□□□ 0.48
USP46P62068 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.02■□□□□ 0.48
USP46P62068 SLC25A6P2-201ENST00000497974 877 ntBASIC18.02■□□□□ 0.48
USP46P62068 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.02■□□□□ 0.48
USP46P62068 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP46P62068 AC002347.1-201ENST00000569543 541 ntBASIC18.02■□□□□ 0.48
USP46P62068 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
USP46P62068 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.02■□□□□ 0.48
USP46P62068 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
USP46P62068 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
USP46P62068 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP46P62068 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.02■□□□□ 0.47
USP46P62068 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
USP46P62068 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
USP46P62068 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.02■□□□□ 0.47
USP46P62068 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP46P62068 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
USP46P62068 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
USP46P62068 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
USP46P62068 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.02■□□□□ 0.47
USP46P62068 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
USP46P62068 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
USP46P62068 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
USP46P62068 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP46P62068 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP46P62068 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP46P62068 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
USP46P62068 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USP46P62068 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
USP46P62068 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP46P62068 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP46P62068 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP46P62068 SLC25A1P3-201ENST00000395415 828 ntBASIC18.01■□□□□ 0.47
USP46P62068 UPF3AP3-201ENST00000420996 769 ntBASIC18.01■□□□□ 0.47
USP46P62068 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.01■□□□□ 0.47
USP46P62068 AC112482.1-201ENST00000492080 688 ntBASIC18.01■□□□□ 0.47
USP46P62068 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
USP46P62068 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.01■□□□□ 0.47
USP46P62068 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.01■□□□□ 0.47
USP46P62068 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.01■□□□□ 0.47
USP46P62068 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
USP46P62068 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP46P62068 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP46P62068 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
USP46P62068 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
USP46P62068 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP46P62068 AC046158.3-201ENST00000624947 2558 ntBASIC18.01■□□□□ 0.47
USP46P62068 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.01■□□□□ 0.47
USP46P62068 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP46P62068 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP46P62068 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.01■□□□□ 0.47
USP46P62068 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USP46P62068 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
USP46P62068 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms