Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SEC61A1P61619 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
SEC61A1P61619 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SEC61A1P61619 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.1■□□□□ 0.01
SEC61A1P61619 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SEC61A1P61619 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.09■□□□□ 0.01
SEC61A1P61619 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.09■□□□□ 0.01
SEC61A1P61619 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.09■□□□□ 0.01
SEC61A1P61619 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SEC61A1P61619 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.09■□□□□ 0.01
SEC61A1P61619 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
SEC61A1P61619 AL450487.1-201ENST00000426799 995 ntBASIC15.09■□□□□ 0.01
SEC61A1P61619 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.09■□□□□ 0.01
SEC61A1P61619 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SEC61A1P61619 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.09■□□□□ 0.01
SEC61A1P61619 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.09■□□□□ 0.01
SEC61A1P61619 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 AL355312.1-201ENST00000407115 2176 ntBASIC15.09■□□□□ 0.01
SEC61A1P61619 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.09■□□□□ 0.01
SEC61A1P61619 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SEC61A1P61619 LINC00167-201ENST00000530583 1419 ntBASIC15.09■□□□□ 0.01
SEC61A1P61619 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
SEC61A1P61619 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SEC61A1P61619 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
SEC61A1P61619 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SEC61A1P61619 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SEC61A1P61619 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
SEC61A1P61619 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.08■□□□□ 0.01
SEC61A1P61619 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
SEC61A1P61619 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SEC61A1P61619 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SEC61A1P61619 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SEC61A1P61619 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.08■□□□□ 0.01
SEC61A1P61619 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SEC61A1P61619 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SEC61A1P61619 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SEC61A1P61619 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
SEC61A1P61619 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SEC61A1P61619 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SEC61A1P61619 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.08■□□□□ 0
SEC61A1P61619 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 RN7SL606P-201ENST00000472779 293 ntBASIC15.08■□□□□ 0
SEC61A1P61619 AC091607.1-201ENST00000490318 1060 ntBASIC15.08■□□□□ 0
SEC61A1P61619 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.08■□□□□ 0
SEC61A1P61619 GUSBP12-201ENST00000513727 720 ntBASIC15.08■□□□□ 0
SEC61A1P61619 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.08■□□□□ 0
SEC61A1P61619 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.08■□□□□ 0
SEC61A1P61619 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.08■□□□□ 0
SEC61A1P61619 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.08■□□□□ 0
SEC61A1P61619 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SEC61A1P61619 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.08■□□□□ 0
SEC61A1P61619 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.08■□□□□ 0
SEC61A1P61619 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SEC61A1P61619 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 PCDHB17P-201ENST00000539533 2393 ntBASIC15.07■□□□□ 0
SEC61A1P61619 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.07■□□□□ 0
SEC61A1P61619 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.07■□□□□ 0
SEC61A1P61619 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.07■□□□□ 0
SEC61A1P61619 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.07■□□□□ 0
SEC61A1P61619 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SEC61A1P61619 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms