Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.85■□□□□ 0.45
EPHB3P54753 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.85■□□□□ 0.45
EPHB3P54753 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.85■□□□□ 0.45
EPHB3P54753 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.85■□□□□ 0.45
EPHB3P54753 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.85■□□□□ 0.45
EPHB3P54753 AC022145.2-201ENST00000598203 171 ntBASIC17.85■□□□□ 0.45
EPHB3P54753 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.85■□□□□ 0.45
EPHB3P54753 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.85■□□□□ 0.45
EPHB3P54753 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
EPHB3P54753 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.84■□□□□ 0.45
EPHB3P54753 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.84■□□□□ 0.45
EPHB3P54753 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.84■□□□□ 0.45
EPHB3P54753 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.84■□□□□ 0.45
EPHB3P54753 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.84■□□□□ 0.45
EPHB3P54753 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 TIMM8BP1-201ENST00000452384 211 ntBASIC17.84■□□□□ 0.45
EPHB3P54753 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.84■□□□□ 0.45
EPHB3P54753 CYMP-203ENST00000474680 1263 ntBASIC17.84■□□□□ 0.45
EPHB3P54753 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.84■□□□□ 0.45
EPHB3P54753 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 AC004449.1-201ENST00000564240 433 ntBASIC17.84■□□□□ 0.45
EPHB3P54753 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
EPHB3P54753 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.84■□□□□ 0.45
EPHB3P54753 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.84■□□□□ 0.45
EPHB3P54753 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
EPHB3P54753 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.84■□□□□ 0.45
EPHB3P54753 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
EPHB3P54753 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
EPHB3P54753 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
EPHB3P54753 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.83■□□□□ 0.45
EPHB3P54753 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
EPHB3P54753 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
EPHB3P54753 AC012569.1-201ENST00000591191 1524 ntBASIC17.83■□□□□ 0.45
EPHB3P54753 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
EPHB3P54753 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
EPHB3P54753 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
EPHB3P54753 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
EPHB3P54753 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EPHB3P54753 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.83■□□□□ 0.44
EPHB3P54753 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
EPHB3P54753 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EPHB3P54753 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
EPHB3P54753 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
EPHB3P54753 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
EPHB3P54753 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.83■□□□□ 0.44
EPHB3P54753 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.83■□□□□ 0.44
EPHB3P54753 AC026120.1-201ENST00000611536 926 ntBASIC17.83■□□□□ 0.44
EPHB3P54753 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
EPHB3P54753 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
EPHB3P54753 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.83■□□□□ 0.44
EPHB3P54753 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
EPHB3P54753 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
EPHB3P54753 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
EPHB3P54753 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
EPHB3P54753 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
EPHB3P54753 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EPHB3P54753 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
EPHB3P54753 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.83■□□□□ 0.44
EPHB3P54753 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.83■□□□□ 0.44
EPHB3P54753 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
EPHB3P54753 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.82■□□□□ 0.44
EPHB3P54753 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.82■□□□□ 0.44
EPHB3P54753 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EPHB3P54753 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
EPHB3P54753 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.82■□□□□ 0.44
EPHB3P54753 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EPHB3P54753 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EPHB3P54753 NOC2LP1-202ENST00000452600 2235 ntBASIC17.82■□□□□ 0.44
EPHB3P54753 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
EPHB3P54753 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
EPHB3P54753 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms