Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.81■□□□□ 0.6
ATN1P54259 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATN1P54259 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATN1P54259 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.8■□□□□ 0.6
ATN1P54259 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.8■□□□□ 0.6
ATN1P54259 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATN1P54259 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.8■□□□□ 0.6
ATN1P54259 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATN1P54259 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.8■□□□□ 0.6
ATN1P54259 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.8■□□□□ 0.6
ATN1P54259 AC005412.3-201ENST00000580309 715 ntBASIC18.8■□□□□ 0.6
ATN1P54259 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.8■□□□□ 0.6
ATN1P54259 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ATN1P54259 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.8■□□□□ 0.6
ATN1P54259 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ATN1P54259 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ATN1P54259 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.8■□□□□ 0.6
ATN1P54259 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATN1P54259 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATN1P54259 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.79■□□□□ 0.6
ATN1P54259 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.79■□□□□ 0.6
ATN1P54259 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATN1P54259 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATN1P54259 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATN1P54259 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.79■□□□□ 0.6
ATN1P54259 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.79■□□□□ 0.6
ATN1P54259 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATN1P54259 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATN1P54259 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.79■□□□□ 0.6
ATN1P54259 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATN1P54259 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATN1P54259 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ATN1P54259 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATN1P54259 TSSK5P-201ENST00000423978 907 ntBASIC18.79■□□□□ 0.6
ATN1P54259 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ATN1P54259 IGHV3-71-201ENST00000523324 359 ntBASIC18.79■□□□□ 0.6
ATN1P54259 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ATN1P54259 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.79■□□□□ 0.6
ATN1P54259 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.79■□□□□ 0.6
ATN1P54259 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATN1P54259 AC022144.1-201ENST00000602255 1580 ntBASIC18.79■□□□□ 0.6
ATN1P54259 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATN1P54259 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ATN1P54259 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.79■□□□□ 0.6
ATN1P54259 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ATN1P54259 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.79■□□□□ 0.6
ATN1P54259 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATN1P54259 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATN1P54259 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.79■□□□□ 0.6
ATN1P54259 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.79■□□□□ 0.6
ATN1P54259 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATN1P54259 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATN1P54259 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ATN1P54259 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ATN1P54259 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATN1P54259 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ATN1P54259 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATN1P54259 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATN1P54259 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.78■□□□□ 0.6
ATN1P54259 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.78■□□□□ 0.6
ATN1P54259 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATN1P54259 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.78■□□□□ 0.6
ATN1P54259 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATN1P54259 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATN1P54259 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATN1P54259 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ATN1P54259 CU639417.3-201ENST00000624240 1404 ntBASIC18.78■□□□□ 0.6
ATN1P54259 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATN1P54259 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATN1P54259 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
ATN1P54259 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ATN1P54259 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC18.78■□□□□ 0.6
ATN1P54259 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.78■□□□□ 0.6
ATN1P54259 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.78■□□□□ 0.6
ATN1P54259 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.78■□□□□ 0.6
ATN1P54259 U91328.1-201ENST00000437528 223 ntBASIC18.78■□□□□ 0.6
ATN1P54259 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.78■□□□□ 0.6
ATN1P54259 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATN1P54259 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.78■□□□□ 0.6
ATN1P54259 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.78■□□□□ 0.6
ATN1P54259 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.78■□□□□ 0.6
ATN1P54259 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.78■□□□□ 0.6
ATN1P54259 AC109635.5-201ENST00000533593 962 ntBASIC18.78■□□□□ 0.6
ATN1P54259 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATN1P54259 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.78■□□□□ 0.6
ATN1P54259 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms