Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-5P52952 DUTP2-201ENST00000519164 463 ntBASIC14.62□□□□□ -0.07
NKX2-5P52952 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX2-5P52952 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX2-5P52952 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NKX2-5P52952 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX2-5P52952 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-5P52952 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-5P52952 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-5P52952 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-5P52952 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-5P52952 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-5P52952 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX2-5P52952 AC005252.3-201ENST00000623855 2258 ntBASIC14.62□□□□□ -0.07
NKX2-5P52952 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-5P52952 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.62□□□□□ -0.07
NKX2-5P52952 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NKX2-5P52952 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NKX2-5P52952 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
NKX2-5P52952 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX2-5P52952 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX2-5P52952 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX2-5P52952 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.61□□□□□ -0.07
NKX2-5P52952 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX2-5P52952 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX2-5P52952 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
NKX2-5P52952 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX2-5P52952 AC135279.3-201ENST00000610945 1311 ntBASIC14.61□□□□□ -0.07
NKX2-5P52952 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.61□□□□□ -0.07
NKX2-5P52952 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NKX2-5P52952 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-5P52952 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-5P52952 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-5P52952 AP005117.1-202ENST00000581724 1908 ntBASIC14.6□□□□□ -0.07
NKX2-5P52952 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-5P52952 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-5P52952 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-5P52952 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-5P52952 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NKX2-5P52952 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-5P52952 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-5P52952 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NKX2-5P52952 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.6□□□□□ -0.07
NKX2-5P52952 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-5P52952 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-5P52952 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.6□□□□□ -0.07
NKX2-5P52952 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.6□□□□□ -0.07
NKX2-5P52952 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.6□□□□□ -0.07
NKX2-5P52952 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-5P52952 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.6□□□□□ -0.07
NKX2-5P52952 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.6□□□□□ -0.07
NKX2-5P52952 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-5P52952 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-5P52952 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NKX2-5P52952 AC009102.3-201ENST00000623118 1491 ntBASIC14.6□□□□□ -0.07
NKX2-5P52952 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NKX2-5P52952 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-5P52952 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-5P52952 AC010327.5-201ENST00000586923 3061 ntBASIC14.6□□□□□ -0.07
NKX2-5P52952 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-5P52952 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-5P52952 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.6□□□□□ -0.07
NKX2-5P52952 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.6□□□□□ -0.07
NKX2-5P52952 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-5P52952 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-5P52952 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-5P52952 AL596087.1-201ENST00000400979 1969 ntBASIC14.6□□□□□ -0.07
NKX2-5P52952 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-5P52952 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-5P52952 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-5P52952 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NKX2-5P52952 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
NKX2-5P52952 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-5P52952 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-5P52952 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-5P52952 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-5P52952 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-5P52952 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NKX2-5P52952 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX2-5P52952 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-5P52952 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
NKX2-5P52952 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-5P52952 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-5P52952 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms