Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
GPC3P51654 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GPC3P51654 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC3P51654 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC3P51654 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC3P51654 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC3P51654 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
GPC3P51654 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC3P51654 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC3P51654 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.91■□□□□ 0.62
GPC3P51654 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC3P51654 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC3P51654 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
GPC3P51654 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC3P51654 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
GPC3P51654 AC092183.1-201ENST00000469884 875 ntBASIC18.91■□□□□ 0.62
GPC3P51654 ALG1L5P-201ENST00000482043 771 ntBASIC18.91■□□□□ 0.62
GPC3P51654 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.91■□□□□ 0.62
GPC3P51654 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.91■□□□□ 0.62
GPC3P51654 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.91■□□□□ 0.62
GPC3P51654 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.91■□□□□ 0.62
GPC3P51654 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC3P51654 OR6D1P-202ENST00000641007 5290 ntBASIC18.91■□□□□ 0.62
GPC3P51654 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.91■□□□□ 0.62
GPC3P51654 BCAR1-209ENST00000546196 1340 ntBASIC18.91■□□□□ 0.62
GPC3P51654 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.91■□□□□ 0.62
GPC3P51654 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
GPC3P51654 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GPC3P51654 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC3P51654 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.91■□□□□ 0.62
GPC3P51654 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
GPC3P51654 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC3P51654 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.9■□□□□ 0.62
GPC3P51654 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC3P51654 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC3P51654 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GPC3P51654 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC3P51654 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GPC3P51654 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC3P51654 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
GPC3P51654 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GPC3P51654 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.9■□□□□ 0.62
GPC3P51654 AC004967.1-201ENST00000453589 447 ntBASIC18.9■□□□□ 0.62
GPC3P51654 CXCL1P1-201ENST00000502804 216 ntBASIC18.9■□□□□ 0.62
GPC3P51654 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.9■□□□□ 0.62
GPC3P51654 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.9■□□□□ 0.62
GPC3P51654 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.9■□□□□ 0.62
GPC3P51654 KRT19P2-202ENST00000557173 1012 ntBASIC18.9■□□□□ 0.62
GPC3P51654 PDPK2P-202ENST00000562415 1191 ntBASIC18.9■□□□□ 0.62
GPC3P51654 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.9■□□□□ 0.62
GPC3P51654 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC3P51654 AC134684.3-201ENST00000641758 218 ntBASIC18.9■□□□□ 0.62
GPC3P51654 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC3P51654 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GPC3P51654 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GPC3P51654 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GPC3P51654 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC3P51654 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.9■□□□□ 0.62
GPC3P51654 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GPC3P51654 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.9■□□□□ 0.62
GPC3P51654 AC016396.2-201ENST00000562575 1417 ntBASIC18.9■□□□□ 0.62
GPC3P51654 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
GPC3P51654 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.9■□□□□ 0.62
GPC3P51654 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
GPC3P51654 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.89■□□□□ 0.62
GPC3P51654 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GPC3P51654 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC3P51654 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC3P51654 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
GPC3P51654 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC3P51654 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
GPC3P51654 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
GPC3P51654 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC3P51654 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
GPC3P51654 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
GPC3P51654 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GPC3P51654 AC087163.2-201ENST00000457299 853 ntBASIC18.89■□□□□ 0.61
GPC3P51654 SLC25A6P2-201ENST00000497974 877 ntBASIC18.89■□□□□ 0.61
GPC3P51654 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.89■□□□□ 0.61
GPC3P51654 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.89■□□□□ 0.61
GPC3P51654 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
GPC3P51654 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GPC3P51654 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC3P51654 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
GPC3P51654 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC3P51654 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GPC3P51654 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GPC3P51654 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.89■□□□□ 0.61
GPC3P51654 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GPC3P51654 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GPC3P51654 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC3P51654 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
GPC3P51654 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.88■□□□□ 0.61
GPC3P51654 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC3P51654 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GPC3P51654 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.88■□□□□ 0.61
GPC3P51654 YBX1P5-201ENST00000509441 847 ntBASIC18.88■□□□□ 0.61
GPC3P51654 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.88■□□□□ 0.61
GPC3P51654 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.88■□□□□ 0.61
GPC3P51654 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms