Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTTP42858 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTTP42858 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTTP42858 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.02■□□□□ 0.64
HTTP42858 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.02■□□□□ 0.64
HTTP42858 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HTTP42858 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTTP42858 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HTTP42858 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HTTP42858 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HTTP42858 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.63
HTTP42858 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HTTP42858 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HTTP42858 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HTTP42858 RNU1-129P-201ENST00000384064 167 ntBASIC19.02■□□□□ 0.63
HTTP42858 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.02■□□□□ 0.63
HTTP42858 U1.21-201ENST00000580816 167 ntBASIC19.02■□□□□ 0.63
HTTP42858 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.02■□□□□ 0.63
HTTP42858 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.02■□□□□ 0.63
HTTP42858 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HTTP42858 MIR6775-201ENST00000617557 69 ntBASIC19.02■□□□□ 0.63
HTTP42858 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.02■□□□□ 0.63
HTTP42858 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HTTP42858 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HTTP42858 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HTTP42858 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HTTP42858 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
HTTP42858 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTTP42858 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.01■□□□□ 0.63
HTTP42858 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.01■□□□□ 0.63
HTTP42858 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.01■□□□□ 0.63
HTTP42858 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.01■□□□□ 0.63
HTTP42858 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
HTTP42858 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTTP42858 WIZP1-201ENST00000531444 2299 ntBASIC19.01■□□□□ 0.63
HTTP42858 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.01■□□□□ 0.63
HTTP42858 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.01■□□□□ 0.63
HTTP42858 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HTTP42858 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTTP42858 AC073389.1-201ENST00000595595 795 ntBASIC19.01■□□□□ 0.63
HTTP42858 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HTTP42858 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.01■□□□□ 0.63
HTTP42858 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HTTP42858 NME6-203ENST00000415644 849 ntTSL 2 BASIC19■□□□□ 0.63
HTTP42858 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19■□□□□ 0.63
HTTP42858 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTTP42858 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
HTTP42858 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HTTP42858 AC020907.1-201ENST00000616460 1350 ntBASIC19■□□□□ 0.63
HTTP42858 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19■□□□□ 0.63
HTTP42858 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19■□□□□ 0.63
HTTP42858 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19■□□□□ 0.63
HTTP42858 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19■□□□□ 0.63
HTTP42858 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HTTP42858 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19■□□□□ 0.63
HTTP42858 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTTP42858 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HTTP42858 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTTP42858 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19■□□□□ 0.63
HTTP42858 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTTP42858 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19■□□□□ 0.63
HTTP42858 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19■□□□□ 0.63
HTTP42858 MTRF1LP2-201ENST00000506027 1122 ntBASIC19■□□□□ 0.63
HTTP42858 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19■□□□□ 0.63
HTTP42858 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19■□□□□ 0.63
HTTP42858 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
HTTP42858 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19■□□□□ 0.63
HTTP42858 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HTTP42858 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTTP42858 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTTP42858 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTTP42858 SPDYE19P-201ENST00000338590 713 ntBASIC18.99■□□□□ 0.63
HTTP42858 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.99■□□□□ 0.63
HTTP42858 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.99■□□□□ 0.63
HTTP42858 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HTTP42858 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.99■□□□□ 0.63
HTTP42858 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HTTP42858 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTTP42858 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTTP42858 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTTP42858 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HTTP42858 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HTTP42858 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.99■□□□□ 0.63
HTTP42858 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.99■□□□□ 0.63
HTTP42858 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.99■□□□□ 0.63
HTTP42858 MIR6869-201ENST00000619434 62 ntBASIC18.99■□□□□ 0.63
HTTP42858 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTTP42858 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTTP42858 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.99■□□□□ 0.63
HTTP42858 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HTTP42858 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.99■□□□□ 0.63
HTTP42858 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HTTP42858 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.99■□□□□ 0.63
HTTP42858 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.99■□□□□ 0.63
HTTP42858 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HTTP42858 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.99■□□□□ 0.63
HTTP42858 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HTTP42858 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.98■□□□□ 0.63
HTTP42858 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.98■□□□□ 0.63
HTTP42858 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms