Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.27■□□□□ 0.04
HOXC12P31275 AC134684.3-201ENST00000641758 218 ntBASIC15.27■□□□□ 0.04
HOXC12P31275 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HOXC12P31275 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.27■□□□□ 0.03
HOXC12P31275 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HOXC12P31275 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.27■□□□□ 0.03
HOXC12P31275 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HOXC12P31275 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
HOXC12P31275 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HOXC12P31275 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.27■□□□□ 0.03
HOXC12P31275 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.27■□□□□ 0.03
HOXC12P31275 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HOXC12P31275 AC046185.3-201ENST00000623228 1824 ntBASIC15.27■□□□□ 0.03
HOXC12P31275 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.26■□□□□ 0.03
HOXC12P31275 NCF1C-201ENST00000438382 1427 ntBASIC15.26■□□□□ 0.03
HOXC12P31275 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HOXC12P31275 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.26■□□□□ 0.03
HOXC12P31275 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HOXC12P31275 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.26■□□□□ 0.03
HOXC12P31275 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 AC007613.1-201ENST00000572811 2597 ntBASIC15.26■□□□□ 0.03
HOXC12P31275 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HOXC12P31275 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.26■□□□□ 0.03
HOXC12P31275 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HOXC12P31275 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.26■□□□□ 0.03
HOXC12P31275 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.26■□□□□ 0.03
HOXC12P31275 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HOXC12P31275 AC012640.2-201ENST00000561606 901 ntBASIC15.26■□□□□ 0.03
HOXC12P31275 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HOXC12P31275 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.26■□□□□ 0.03
HOXC12P31275 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.26■□□□□ 0.03
HOXC12P31275 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HOXC12P31275 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HOXC12P31275 AC008764.6-201ENST00000595909 2069 ntBASIC15.26■□□□□ 0.03
HOXC12P31275 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.26■□□□□ 0.03
HOXC12P31275 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.26■□□□□ 0.03
HOXC12P31275 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HOXC12P31275 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.26■□□□□ 0.03
HOXC12P31275 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 AC133963.1-201ENST00000504166 1679 ntBASIC15.25■□□□□ 0.03
HOXC12P31275 REXO1L11P-201ENST00000620964 1927 ntBASIC15.25■□□□□ 0.03
HOXC12P31275 AL355312.1-201ENST00000407115 2176 ntBASIC15.25■□□□□ 0.03
HOXC12P31275 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.25■□□□□ 0.03
HOXC12P31275 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 LINC00304-203ENST00000565008 1864 ntBASIC15.25■□□□□ 0.03
HOXC12P31275 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.25■□□□□ 0.03
HOXC12P31275 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HOXC12P31275 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HOXC12P31275 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.25■□□□□ 0.03
HOXC12P31275 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.25■□□□□ 0.03
HOXC12P31275 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HOXC12P31275 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.25■□□□□ 0.03
HOXC12P31275 AC004832.2-201ENST00000426397 482 ntBASIC15.25■□□□□ 0.03
HOXC12P31275 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
HOXC12P31275 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.25■□□□□ 0.03
HOXC12P31275 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
HOXC12P31275 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
HOXC12P31275 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.25■□□□□ 0.03
HOXC12P31275 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.25■□□□□ 0.03
HOXC12P31275 AL139327.4-201ENST00000612362 153 ntBASIC15.25■□□□□ 0.03
HOXC12P31275 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.25■□□□□ 0.03
HOXC12P31275 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.25■□□□□ 0.03
HOXC12P31275 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.25■□□□□ 0.03
HOXC12P31275 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HOXC12P31275 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.25■□□□□ 0.03
HOXC12P31275 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HOXC12P31275 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HOXC12P31275 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HOXC12P31275 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.25■□□□□ 0.03
HOXC12P31275 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HOXC12P31275 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.25■□□□□ 0.03
HOXC12P31275 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms