Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
RFX1P22670 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.71■□□□□ 0.59
RFX1P22670 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.7■□□□□ 0.58
RFX1P22670 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX1P22670 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX1P22670 AC009053.2-201ENST00000563701 2365 ntBASIC18.7■□□□□ 0.58
RFX1P22670 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.7■□□□□ 0.58
RFX1P22670 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX1P22670 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RFX1P22670 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.7■□□□□ 0.58
RFX1P22670 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX1P22670 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX1P22670 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.7■□□□□ 0.58
RFX1P22670 UPF3AP3-201ENST00000420996 769 ntBASIC18.7■□□□□ 0.58
RFX1P22670 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX1P22670 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.7■□□□□ 0.58
RFX1P22670 EGFEM1P-202ENST00000431685 1563 ntBASIC18.7■□□□□ 0.58
RFX1P22670 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.7■□□□□ 0.58
RFX1P22670 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFX1P22670 AL356488.2-201ENST00000602755 427 ntBASIC18.7■□□□□ 0.58
RFX1P22670 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.7■□□□□ 0.58
RFX1P22670 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RFX1P22670 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.7■□□□□ 0.58
RFX1P22670 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX1P22670 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFX1P22670 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFX1P22670 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RFX1P22670 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RFX1P22670 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RFX1P22670 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX1P22670 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RFX1P22670 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX1P22670 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RFX1P22670 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.7■□□□□ 0.58
RFX1P22670 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.69■□□□□ 0.58
RFX1P22670 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.69■□□□□ 0.58
RFX1P22670 NFIC-211ENST00000641145 8399 ntBASIC18.69■□□□□ 0.58
RFX1P22670 AC022211.2-201ENST00000585075 2527 ntBASIC18.69■□□□□ 0.58
RFX1P22670 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.69■□□□□ 0.58
RFX1P22670 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX1P22670 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX1P22670 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.69■□□□□ 0.58
RFX1P22670 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RFX1P22670 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
RFX1P22670 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX1P22670 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFX1P22670 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX1P22670 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.69■□□□□ 0.58
RFX1P22670 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.69■□□□□ 0.58
RFX1P22670 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.69■□□□□ 0.58
RFX1P22670 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.69■□□□□ 0.58
RFX1P22670 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.69■□□□□ 0.58
RFX1P22670 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RFX1P22670 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.69■□□□□ 0.58
RFX1P22670 AC140113.2-201ENST00000604370 208 ntBASIC18.69■□□□□ 0.58
RFX1P22670 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFX1P22670 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.69■□□□□ 0.58
RFX1P22670 AC073592.5-201ENST00000624854 528 ntBASIC18.69■□□□□ 0.58
RFX1P22670 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX1P22670 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RFX1P22670 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RFX1P22670 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX1P22670 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX1P22670 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RFX1P22670 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RFX1P22670 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RFX1P22670 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFX1P22670 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX1P22670 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX1P22670 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFX1P22670 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
RFX1P22670 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX1P22670 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFX1P22670 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RFX1P22670 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX1P22670 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.68■□□□□ 0.58
RFX1P22670 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.68■□□□□ 0.58
RFX1P22670 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.68■□□□□ 0.58
RFX1P22670 AL591424.1-201ENST00000442569 1213 ntBASIC18.68■□□□□ 0.58
RFX1P22670 DNAJB3-201ENST00000446806 729 ntBASIC18.68■□□□□ 0.58
RFX1P22670 FGFR3P6-201ENST00000457012 610 ntBASIC18.68■□□□□ 0.58
RFX1P22670 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RFX1P22670 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.68■□□□□ 0.58
RFX1P22670 FAM197Y3-203ENST00000618346 717 ntBASIC18.68■□□□□ 0.58
RFX1P22670 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.68■□□□□ 0.58
RFX1P22670 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.68■□□□□ 0.58
RFX1P22670 AL135999.2-201ENST00000622438 1686 ntBASIC18.68■□□□□ 0.58
RFX1P22670 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RFX1P22670 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX1P22670 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RFX1P22670 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX1P22670 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX1P22670 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.68■□□□□ 0.58
RFX1P22670 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RFX1P22670 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.68■□□□□ 0.58
RFX1P22670 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RFX1P22670 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RFX1P22670 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RFX1P22670 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RFX1P22670 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms