Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RHOP08100 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RHOP08100 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.67■□□□□ 0.42
RHOP08100 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.67■□□□□ 0.42
RHOP08100 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RHOP08100 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RHOP08100 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.67■□□□□ 0.42
RHOP08100 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RHOP08100 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.67■□□□□ 0.42
RHOP08100 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RHOP08100 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RHOP08100 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RHOP08100 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.66■□□□□ 0.42
RHOP08100 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.66■□□□□ 0.42
RHOP08100 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
RHOP08100 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.66■□□□□ 0.42
RHOP08100 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RHOP08100 HCG4-201ENST00000418983 998 ntBASIC17.66■□□□□ 0.42
RHOP08100 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.66■□□□□ 0.42
RHOP08100 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 RNA5SP421-201ENST00000516864 134 ntBASIC17.66■□□□□ 0.42
RHOP08100 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.66■□□□□ 0.42
RHOP08100 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.66■□□□□ 0.42
RHOP08100 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.66■□□□□ 0.42
RHOP08100 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.66■□□□□ 0.42
RHOP08100 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RHOP08100 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.66■□□□□ 0.42
RHOP08100 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.66■□□□□ 0.42
RHOP08100 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RHOP08100 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
RHOP08100 UXT-AS1-201ENST00000590504 1525 ntBASIC17.66■□□□□ 0.42
RHOP08100 TUBB3P1-201ENST00000405796 1332 ntBASIC17.66■□□□□ 0.42
RHOP08100 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
RHOP08100 EGFEM1P-202ENST00000431685 1563 ntBASIC17.66■□□□□ 0.42
RHOP08100 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHOP08100 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHOP08100 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RHOP08100 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RHOP08100 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.65■□□□□ 0.42
RHOP08100 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHOP08100 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHOP08100 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHOP08100 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHOP08100 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.65■□□□□ 0.42
RHOP08100 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.65■□□□□ 0.42
RHOP08100 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.65■□□□□ 0.42
RHOP08100 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RHOP08100 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.65■□□□□ 0.42
RHOP08100 COX20P2-201ENST00000452636 358 ntBASIC17.65■□□□□ 0.42
RHOP08100 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.65■□□□□ 0.42
RHOP08100 KRT8P23-201ENST00000560090 1207 ntBASIC17.65■□□□□ 0.42
RHOP08100 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHOP08100 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.65■□□□□ 0.42
RHOP08100 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.65■□□□□ 0.42
RHOP08100 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RHOP08100 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHOP08100 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHOP08100 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
RHOP08100 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHOP08100 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHOP08100 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHOP08100 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RHOP08100 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHOP08100 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RHOP08100 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RHOP08100 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.42
RHOP08100 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.64■□□□□ 0.41
RHOP08100 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.64■□□□□ 0.41
RHOP08100 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RHOP08100 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.64■□□□□ 0.41
RHOP08100 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.64■□□□□ 0.41
RHOP08100 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RHOP08100 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms