Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IFNA1P01562 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFNA1P01562 AL355355.2-201ENST00000442321 338 ntBASIC13.63□□□□□ -0.23
IFNA1P01562 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.63□□□□□ -0.23
IFNA1P01562 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.63□□□□□ -0.23
IFNA1P01562 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.63□□□□□ -0.23
IFNA1P01562 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFNA1P01562 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IFNA1P01562 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IFNA1P01562 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFNA1P01562 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFNA1P01562 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFNA1P01562 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFNA1P01562 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
IFNA1P01562 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IFNA1P01562 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFNA1P01562 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.63□□□□□ -0.23
IFNA1P01562 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFNA1P01562 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
IFNA1P01562 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.63□□□□□ -0.23
IFNA1P01562 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.63□□□□□ -0.23
IFNA1P01562 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
IFNA1P01562 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFNA1P01562 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
IFNA1P01562 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFNA1P01562 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
IFNA1P01562 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
IFNA1P01562 AC004911.1-201ENST00000416316 871 ntBASIC13.62□□□□□ -0.23
IFNA1P01562 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.62□□□□□ -0.23
IFNA1P01562 AC005104.2-201ENST00000427818 678 ntBASIC13.62□□□□□ -0.23
IFNA1P01562 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.62□□□□□ -0.23
IFNA1P01562 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
IFNA1P01562 AP002982.1-201ENST00000492365 877 ntBASIC13.62□□□□□ -0.23
IFNA1P01562 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.62□□□□□ -0.23
IFNA1P01562 AL139327.4-201ENST00000612362 153 ntBASIC13.62□□□□□ -0.23
IFNA1P01562 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.62□□□□□ -0.23
IFNA1P01562 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
IFNA1P01562 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
IFNA1P01562 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
IFNA1P01562 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.62□□□□□ -0.23
IFNA1P01562 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
IFNA1P01562 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
IFNA1P01562 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.62□□□□□ -0.23
IFNA1P01562 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.62□□□□□ -0.23
IFNA1P01562 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
IFNA1P01562 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.62□□□□□ -0.23
IFNA1P01562 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
IFNA1P01562 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.61□□□□□ -0.23
IFNA1P01562 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.61□□□□□ -0.23
IFNA1P01562 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.61□□□□□ -0.23
IFNA1P01562 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
IFNA1P01562 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.61□□□□□ -0.23
IFNA1P01562 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
IFNA1P01562 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.61□□□□□ -0.23
IFNA1P01562 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
IFNA1P01562 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC13.61□□□□□ -0.23
IFNA1P01562 KSR1P1-201ENST00000446298 240 ntBASIC13.61□□□□□ -0.23
IFNA1P01562 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.61□□□□□ -0.23
IFNA1P01562 MYC-209ENST00000641252 345 ntBASIC13.61□□□□□ -0.23
IFNA1P01562 AL031985.4-201ENST00000642138 673 ntBASIC13.61□□□□□ -0.23
IFNA1P01562 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.61□□□□□ -0.23
IFNA1P01562 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
IFNA1P01562 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms