Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LGR5O75473 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.96■□□□□ 0.63
LGR5O75473 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.96■□□□□ 0.63
LGR5O75473 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LGR5O75473 ADH5P3-201ENST00000433842 1137 ntBASIC18.96■□□□□ 0.63
LGR5O75473 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.96■□□□□ 0.63
LGR5O75473 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LGR5O75473 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.96■□□□□ 0.63
LGR5O75473 AC112191.1-201ENST00000523689 701 ntBASIC18.96■□□□□ 0.63
LGR5O75473 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.96■□□□□ 0.63
LGR5O75473 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LGR5O75473 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.96■□□□□ 0.63
LGR5O75473 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.96■□□□□ 0.63
LGR5O75473 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.96■□□□□ 0.63
LGR5O75473 AL513210.1-201ENST00000629608 234 ntBASIC18.96■□□□□ 0.63
LGR5O75473 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
LGR5O75473 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.96■□□□□ 0.63
LGR5O75473 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LGR5O75473 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LGR5O75473 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LGR5O75473 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LGR5O75473 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LGR5O75473 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LGR5O75473 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LGR5O75473 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LGR5O75473 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LGR5O75473 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
LGR5O75473 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LGR5O75473 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.95■□□□□ 0.62
LGR5O75473 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LGR5O75473 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.95■□□□□ 0.62
LGR5O75473 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LGR5O75473 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LGR5O75473 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LGR5O75473 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LGR5O75473 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LGR5O75473 AL139400.1-201ENST00000366220 510 ntBASIC18.95■□□□□ 0.62
LGR5O75473 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LGR5O75473 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LGR5O75473 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.95■□□□□ 0.62
LGR5O75473 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.95■□□□□ 0.62
LGR5O75473 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
LGR5O75473 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.95■□□□□ 0.62
LGR5O75473 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LGR5O75473 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.95■□□□□ 0.62
LGR5O75473 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.95■□□□□ 0.62
LGR5O75473 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.95■□□□□ 0.62
LGR5O75473 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.95■□□□□ 0.62
LGR5O75473 AC011467.4-201ENST00000594891 528 ntBASIC18.95■□□□□ 0.62
LGR5O75473 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
LGR5O75473 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.95■□□□□ 0.62
LGR5O75473 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LGR5O75473 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LGR5O75473 AL121761.2-201ENST00000598007 1648 ntBASIC18.95■□□□□ 0.62
LGR5O75473 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LGR5O75473 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LGR5O75473 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LGR5O75473 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGR5O75473 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGR5O75473 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LGR5O75473 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.94■□□□□ 0.62
LGR5O75473 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGR5O75473 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGR5O75473 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
LGR5O75473 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGR5O75473 AC002056.1-201ENST00000395613 760 ntBASIC18.94■□□□□ 0.62
LGR5O75473 HMGA1P7-201ENST00000406908 502 ntBASIC18.94■□□□□ 0.62
LGR5O75473 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.94■□□□□ 0.62
LGR5O75473 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.94■□□□□ 0.62
LGR5O75473 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.94■□□□□ 0.62
LGR5O75473 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.94■□□□□ 0.62
LGR5O75473 AC004835.2-201ENST00000603762 682 ntBASIC18.94■□□□□ 0.62
LGR5O75473 AC099522.2-201ENST00000607001 744 ntBASIC18.94■□□□□ 0.62
LGR5O75473 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.94■□□□□ 0.62
LGR5O75473 AC105339.1-204ENST00000636249 355 ntBASIC18.94■□□□□ 0.62
LGR5O75473 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGR5O75473 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.94■□□□□ 0.62
LGR5O75473 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
LGR5O75473 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LGR5O75473 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGR5O75473 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LGR5O75473 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LGR5O75473 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
LGR5O75473 FRMD8P1-201ENST00000440433 1524 ntBASIC18.94■□□□□ 0.62
LGR5O75473 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
LGR5O75473 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.94■□□□□ 0.62
LGR5O75473 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LGR5O75473 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LGR5O75473 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
LGR5O75473 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LGR5O75473 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LGR5O75473 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LGR5O75473 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.93■□□□□ 0.62
LGR5O75473 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LGR5O75473 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.93■□□□□ 0.62
LGR5O75473 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LGR5O75473 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LGR5O75473 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LGR5O75473 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LGR5O75473 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms