Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE3O75131 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.52■□□□□ 0.24
CPNE3O75131 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CPNE3O75131 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE3O75131 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.52■□□□□ 0.24
CPNE3O75131 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
CPNE3O75131 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE3O75131 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE3O75131 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.52■□□□□ 0.24
CPNE3O75131 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE3O75131 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE3O75131 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE3O75131 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE3O75131 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.52■□□□□ 0.24
CPNE3O75131 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CPNE3O75131 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.52■□□□□ 0.24
CPNE3O75131 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.52■□□□□ 0.24
CPNE3O75131 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.52■□□□□ 0.24
CPNE3O75131 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE3O75131 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.52■□□□□ 0.24
CPNE3O75131 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.52■□□□□ 0.24
CPNE3O75131 AC064836.3-201ENST00000607928 673 ntBASIC16.52■□□□□ 0.24
CPNE3O75131 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE3O75131 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CPNE3O75131 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE3O75131 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.52■□□□□ 0.23
CPNE3O75131 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CPNE3O75131 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE3O75131 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE3O75131 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE3O75131 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE3O75131 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE3O75131 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE3O75131 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE3O75131 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
CPNE3O75131 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE3O75131 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE3O75131 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE3O75131 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE3O75131 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE3O75131 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CPNE3O75131 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE3O75131 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE3O75131 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CPNE3O75131 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CPNE3O75131 DNAJB3-201ENST00000446806 729 ntBASIC16.51■□□□□ 0.23
CPNE3O75131 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.51■□□□□ 0.23
CPNE3O75131 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.51■□□□□ 0.23
CPNE3O75131 RPS15P9-201ENST00000494093 319 ntBASIC16.51■□□□□ 0.23
CPNE3O75131 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE3O75131 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE3O75131 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
CPNE3O75131 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE3O75131 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.51■□□□□ 0.23
CPNE3O75131 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE3O75131 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 AC002347.1-201ENST00000569543 541 ntBASIC16.51■□□□□ 0.23
CPNE3O75131 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE3O75131 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CPNE3O75131 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE3O75131 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CPNE3O75131 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CPNE3O75131 AC097637.2-201ENST00000624096 1997 ntBASIC16.51■□□□□ 0.23
CPNE3O75131 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CPNE3O75131 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CPNE3O75131 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE3O75131 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE3O75131 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms