Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCN1O60741 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCN1O60741 AC096633.1-201ENST00000422446 749 ntBASIC16.1■□□□□ 0.17
HCN1O60741 ABCD1P5-201ENST00000445663 754 ntBASIC16.1■□□□□ 0.17
HCN1O60741 FAM197Y8-203ENST00000450145 560 ntBASIC16.1■□□□□ 0.17
HCN1O60741 AF186996.4-201ENST00000467186 377 ntBASIC16.1■□□□□ 0.17
HCN1O60741 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.1■□□□□ 0.17
HCN1O60741 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.1■□□□□ 0.17
HCN1O60741 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.1■□□□□ 0.17
HCN1O60741 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.1■□□□□ 0.17
HCN1O60741 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.1■□□□□ 0.17
HCN1O60741 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.1■□□□□ 0.17
HCN1O60741 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCN1O60741 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.1■□□□□ 0.17
HCN1O60741 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.1■□□□□ 0.17
HCN1O60741 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.1■□□□□ 0.17
HCN1O60741 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.1■□□□□ 0.17
HCN1O60741 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.1■□□□□ 0.17
HCN1O60741 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.1■□□□□ 0.17
HCN1O60741 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HCN1O60741 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCN1O60741 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HCN1O60741 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HCN1O60741 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.1■□□□□ 0.17
HCN1O60741 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HCN1O60741 REXO1L11P-201ENST00000620964 1927 ntBASIC16.09■□□□□ 0.17
HCN1O60741 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HCN1O60741 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
HCN1O60741 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.09■□□□□ 0.17
HCN1O60741 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HCN1O60741 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.09■□□□□ 0.17
HCN1O60741 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HCN1O60741 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.09■□□□□ 0.17
HCN1O60741 MRPL3P1-201ENST00000400109 1033 ntBASIC16.09■□□□□ 0.17
HCN1O60741 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.09■□□□□ 0.17
HCN1O60741 KRT18P67-201ENST00000432816 1264 ntBASIC16.09■□□□□ 0.17
HCN1O60741 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.09■□□□□ 0.17
HCN1O60741 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HCN1O60741 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 AL773604.1-201ENST00000617417 272 ntBASIC16.09■□□□□ 0.17
HCN1O60741 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.09■□□□□ 0.17
HCN1O60741 TP73-AS1-207ENST00000624167 988 ntBASIC16.09■□□□□ 0.17
HCN1O60741 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.09■□□□□ 0.17
HCN1O60741 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 KRT8P47-201ENST00000604727 1398 ntBASIC16.09■□□□□ 0.17
HCN1O60741 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HCN1O60741 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
HCN1O60741 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.09■□□□□ 0.17
HCN1O60741 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
HCN1O60741 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HCN1O60741 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HCN1O60741 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HCN1O60741 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
HCN1O60741 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCN1O60741 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCN1O60741 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HCN1O60741 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.08■□□□□ 0.17
HCN1O60741 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCN1O60741 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HCN1O60741 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
HCN1O60741 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCN1O60741 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCN1O60741 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.08■□□□□ 0.17
HCN1O60741 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCN1O60741 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HCN1O60741 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCN1O60741 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HCN1O60741 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HCN1O60741 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.08■□□□□ 0.16
HCN1O60741 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
HCN1O60741 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCN1O60741 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCN1O60741 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HCN1O60741 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.08■□□□□ 0.16
HCN1O60741 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCN1O60741 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.08■□□□□ 0.16
HCN1O60741 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.08■□□□□ 0.16
HCN1O60741 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCN1O60741 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.08■□□□□ 0.16
HCN1O60741 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
HCN1O60741 MTDHP3-201ENST00000594186 672 ntBASIC16.08■□□□□ 0.16
HCN1O60741 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HCN1O60741 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms