Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTL8CO15255 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTL8CO15255 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
RTL8CO15255 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTL8CO15255 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RTL8CO15255 STK4-201ENST00000372801 2038 ntTSL 2 BASIC11.41□□□□□ -0.58
RTL8CO15255 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTL8CO15255 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTL8CO15255 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RTL8CO15255 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTL8CO15255 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTL8CO15255 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RTL8CO15255 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTL8CO15255 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RTL8CO15255 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC11.41□□□□□ -0.58
RTL8CO15255 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
RTL8CO15255 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RTL8CO15255 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
RTL8CO15255 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RTL8CO15255 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
RTL8CO15255 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RTL8CO15255 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC11.4□□□□□ -0.58
RTL8CO15255 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.4□□□□□ -0.58
RTL8CO15255 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.4□□□□□ -0.58
RTL8CO15255 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.4□□□□□ -0.58
RTL8CO15255 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
RTL8CO15255 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 AC107890.1-201ENST00000422478 521 ntBASIC11.4□□□□□ -0.58
RTL8CO15255 AC125807.1-201ENST00000483097 614 ntBASIC11.4□□□□□ -0.58
RTL8CO15255 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC11.4□□□□□ -0.58
RTL8CO15255 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC11.4□□□□□ -0.58
RTL8CO15255 AL135744.1-201ENST00000565098 629 ntBASIC11.4□□□□□ -0.58
RTL8CO15255 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.4□□□□□ -0.58
RTL8CO15255 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.4□□□□□ -0.58
RTL8CO15255 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.4□□□□□ -0.58
RTL8CO15255 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC11.4□□□□□ -0.58
RTL8CO15255 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 AP000997.3-201ENST00000623333 2250 ntBASIC11.4□□□□□ -0.58
RTL8CO15255 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC11.4□□□□□ -0.58
RTL8CO15255 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC11.4□□□□□ -0.58
RTL8CO15255 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RTL8CO15255 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
RTL8CO15255 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RTL8CO15255 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RTL8CO15255 FO538757.1-201ENST00000623083 1397 ntBASIC11.4□□□□□ -0.59
RTL8CO15255 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RTL8CO15255 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
RTL8CO15255 AL020996.1-203ENST00000536896 2307 ntBASIC11.4□□□□□ -0.59
RTL8CO15255 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
RTL8CO15255 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
RTL8CO15255 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RTL8CO15255 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RTL8CO15255 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC11.39□□□□□ -0.59
RTL8CO15255 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 OR6D1P-203ENST00000641209 4860 ntBASIC11.39□□□□□ -0.59
RTL8CO15255 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC11.39□□□□□ -0.59
RTL8CO15255 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
RTL8CO15255 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
RTL8CO15255 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC11.39□□□□□ -0.59
RTL8CO15255 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RTL8CO15255 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.39□□□□□ -0.59
RTL8CO15255 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
RTL8CO15255 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC11.39□□□□□ -0.59
RTL8CO15255 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
RTL8CO15255 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 RBPMS2P1-201ENST00000437762 623 ntBASIC11.39□□□□□ -0.59
RTL8CO15255 GAPDHP21-201ENST00000450301 1010 ntBASIC11.39□□□□□ -0.59
RTL8CO15255 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
RTL8CO15255 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.39□□□□□ -0.59
RTL8CO15255 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.39□□□□□ -0.59
RTL8CO15255 MNT-208ENST00000575394 606 ntTSL 4 BASIC11.39□□□□□ -0.59
RTL8CO15255 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms