Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SEMA3EO15041 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.53■□□□□ 0.88
SEMA3EO15041 BCL2-203ENST00000589955 5011 ntBASIC20.53■□□□□ 0.88
SEMA3EO15041 KRT8P49-201ENST00000604166 1432 ntBASIC20.53■□□□□ 0.88
SEMA3EO15041 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.53■□□□□ 0.88
SEMA3EO15041 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SEMA3EO15041 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
SEMA3EO15041 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SEMA3EO15041 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 METTL21AP1-201ENST00000438852 635 ntBASIC20.53■□□□□ 0.88
SEMA3EO15041 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.53■□□□□ 0.88
SEMA3EO15041 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.53■□□□□ 0.88
SEMA3EO15041 MIR3909-201ENST00000579518 119 ntBASIC20.53■□□□□ 0.88
SEMA3EO15041 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.53■□□□□ 0.88
SEMA3EO15041 AC026120.1-201ENST00000611536 926 ntBASIC20.53■□□□□ 0.88
SEMA3EO15041 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.53■□□□□ 0.88
SEMA3EO15041 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.53■□□□□ 0.88
SEMA3EO15041 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 SLC22A20-204ENST00000530038 1673 ntBASIC20.53■□□□□ 0.88
SEMA3EO15041 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.53■□□□□ 0.88
SEMA3EO15041 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.53■□□□□ 0.88
SEMA3EO15041 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.53■□□□□ 0.88
SEMA3EO15041 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SEMA3EO15041 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SEMA3EO15041 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SEMA3EO15041 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SEMA3EO15041 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.52■□□□□ 0.88
SEMA3EO15041 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SEMA3EO15041 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SEMA3EO15041 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SEMA3EO15041 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SEMA3EO15041 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.52■□□□□ 0.88
SEMA3EO15041 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.52■□□□□ 0.88
SEMA3EO15041 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SEMA3EO15041 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SEMA3EO15041 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SEMA3EO15041 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SEMA3EO15041 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
SEMA3EO15041 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.52■□□□□ 0.88
SEMA3EO15041 AL671277.1-201ENST00000429656 993 ntBASIC20.52■□□□□ 0.88
SEMA3EO15041 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.52■□□□□ 0.88
SEMA3EO15041 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.52■□□□□ 0.88
SEMA3EO15041 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.52■□□□□ 0.88
SEMA3EO15041 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.52■□□□□ 0.88
SEMA3EO15041 AL009183.1-201ENST00000603760 355 ntBASIC20.52■□□□□ 0.88
SEMA3EO15041 AL161645.1-201ENST00000622716 1255 ntBASIC20.52■□□□□ 0.88
SEMA3EO15041 LINC02012-201ENST00000608206 1725 ntBASIC20.52■□□□□ 0.88
SEMA3EO15041 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.52■□□□□ 0.88
SEMA3EO15041 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SEMA3EO15041 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SEMA3EO15041 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SEMA3EO15041 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SEMA3EO15041 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEMA3EO15041 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEMA3EO15041 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEMA3EO15041 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.51■□□□□ 0.87
SEMA3EO15041 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEMA3EO15041 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SEMA3EO15041 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEMA3EO15041 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEMA3EO15041 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SEMA3EO15041 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEMA3EO15041 RN7SL589P-201ENST00000481268 310 ntBASIC20.51■□□□□ 0.87
SEMA3EO15041 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.51■□□□□ 0.87
SEMA3EO15041 AC087641.1-201ENST00000557561 1021 ntBASIC20.51■□□□□ 0.87
SEMA3EO15041 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.51■□□□□ 0.87
SEMA3EO15041 MPDU1-223ENST00000582151 728 ntBASIC20.51■□□□□ 0.87
SEMA3EO15041 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.51■□□□□ 0.87
SEMA3EO15041 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.51■□□□□ 0.87
SEMA3EO15041 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.51■□□□□ 0.87
SEMA3EO15041 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEMA3EO15041 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.51■□□□□ 0.87
SEMA3EO15041 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SEMA3EO15041 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SEMA3EO15041 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.51■□□□□ 0.87
SEMA3EO15041 AKAP8P1-201ENST00000434743 1349 ntBASIC20.51■□□□□ 0.87
SEMA3EO15041 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms