Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
O00370 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.32■□□□□ 0.52
O00370 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
O00370 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
O00370 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
O00370 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
O00370 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
O00370 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
O00370 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.31■□□□□ 0.52
O00370 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.31■□□□□ 0.52
O00370 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.31■□□□□ 0.52
O00370 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 LAGE3P1-201ENST00000425356 484 ntBASIC18.31■□□□□ 0.52
O00370 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.31■□□□□ 0.52
O00370 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.31■□□□□ 0.52
O00370 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
O00370 AC139887.3-201ENST00000568585 713 ntBASIC18.31■□□□□ 0.52
O00370 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.31■□□□□ 0.52
O00370 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
O00370 AL139424.1-201ENST00000607572 797 ntBASIC18.31■□□□□ 0.52
O00370 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
O00370 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.31■□□□□ 0.52
O00370 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
O00370 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
O00370 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
O00370 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.3■□□□□ 0.52
O00370 EGFEM1P-202ENST00000431685 1563 ntBASIC18.3■□□□□ 0.52
O00370 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
O00370 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
O00370 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
O00370 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
O00370 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
O00370 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.3■□□□□ 0.52
O00370 MRPL3P1-201ENST00000400109 1033 ntBASIC18.3■□□□□ 0.52
O00370 AC009078.2-202ENST00000463353 338 ntBASIC18.3■□□□□ 0.52
O00370 AF186996.4-201ENST00000467186 377 ntBASIC18.3■□□□□ 0.52
O00370 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.3■□□□□ 0.52
O00370 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.3■□□□□ 0.52
O00370 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.3■□□□□ 0.52
O00370 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.3■□□□□ 0.52
O00370 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.3■□□□□ 0.52
O00370 AC004706.3-202ENST00000621574 984 ntBASIC18.3■□□□□ 0.52
O00370 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
O00370 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
O00370 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
O00370 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
O00370 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
O00370 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
O00370 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
O00370 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
O00370 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.3■□□□□ 0.52
O00370 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
O00370 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
O00370 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
O00370 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
O00370 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
O00370 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
O00370 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.29■□□□□ 0.52
O00370 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.29■□□□□ 0.52
O00370 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.29■□□□□ 0.52
O00370 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
O00370 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.29■□□□□ 0.52
O00370 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
O00370 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
O00370 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.29■□□□□ 0.52
O00370 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
O00370 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
O00370 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
O00370 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.29■□□□□ 0.52
O00370 OR7E14P-202ENST00000530490 1290 ntBASIC18.29■□□□□ 0.52
O00370 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
O00370 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.29■□□□□ 0.52
O00370 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.29■□□□□ 0.52
O00370 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
O00370 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
O00370 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
O00370 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
O00370 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.29■□□□□ 0.52
O00370 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
O00370 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms