Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 AC026691.1-201ENST00000602502 2017 ntBASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV9S1A1TA0A576 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 LINC01238-205ENST00000567549 1107 ntBASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TCRBV9S1A1TA0A576 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 AC008741.2-201ENST00000612792 3115 ntBASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 AL391005.1-201ENST00000623953 2435 ntBASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 AC073592.5-201ENST00000624854 528 ntBASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 CICP6-201ENST00000457191 2729 ntBASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.28■□□□□ 0.36
TCRBV9S1A1TA0A576 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 CYP2T1P-202ENST00000641596 2535 ntBASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TCRBV9S1A1TA0A576 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms