Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 AL121672.3-201ENST00000608644 468 ntBASIC16.15■□□□□ 0.18
IFT52Q9Y366 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
IFT52Q9Y366 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
IFT52Q9Y366 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
IFT52Q9Y366 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 AC005336.2-201ENST00000593183 939 ntBASIC16.14■□□□□ 0.17
IFT52Q9Y366 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
IFT52Q9Y366 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.14■□□□□ 0.17
IFT52Q9Y366 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
IFT52Q9Y366 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.13■□□□□ 0.17
IFT52Q9Y366 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.13■□□□□ 0.17
IFT52Q9Y366 AL845331.1-201ENST00000424978 1190 ntBASIC16.13■□□□□ 0.17
IFT52Q9Y366 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.13■□□□□ 0.17
IFT52Q9Y366 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
IFT52Q9Y366 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.13■□□□□ 0.17
IFT52Q9Y366 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.13■□□□□ 0.17
IFT52Q9Y366 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.13■□□□□ 0.17
IFT52Q9Y366 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.13■□□□□ 0.17
IFT52Q9Y366 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IFT52Q9Y366 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.13■□□□□ 0.17
IFT52Q9Y366 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.13■□□□□ 0.17
IFT52Q9Y366 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.13■□□□□ 0.17
IFT52Q9Y366 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.13■□□□□ 0.17
IFT52Q9Y366 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms