Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 AC254562.1-201ENST00000417586 456 ntBASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 ACTG1P14-201ENST00000446382 1122 ntBASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 CEND1P1-201ENST00000451006 455 ntBASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 AL031432.2-201ENST00000566714 459 ntBASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 AL928711.1-201ENST00000570165 459 ntBASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DENND2AQ9ULE3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 AC091812.2-201ENST00000619081 385 ntBASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 REXO1L3P-201ENST00000622202 1288 ntBASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 AC106820.2-201ENST00000563775 3264 ntBASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
DENND2AQ9ULE3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 SLC25A1P3-201ENST00000395415 828 ntBASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 AL596442.2-201ENST00000610240 980 ntBASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 AC093525.9-201ENST00000624961 1746 ntBASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
DENND2AQ9ULE3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.69■□□□□ 0.9
DENND2AQ9ULE3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms