Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.74■□□□□ 0.75
USP25Q9UHP3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP25Q9UHP3 RN7SL850P-201ENST00000579959 291 ntBASIC19.74■□□□□ 0.75
USP25Q9UHP3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
USP25Q9UHP3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP25Q9UHP3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
USP25Q9UHP3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP25Q9UHP3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP25Q9UHP3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.74■□□□□ 0.75
USP25Q9UHP3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP25Q9UHP3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.74■□□□□ 0.75
USP25Q9UHP3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP25Q9UHP3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP25Q9UHP3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.74■□□□□ 0.75
USP25Q9UHP3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USP25Q9UHP3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP25Q9UHP3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 IGHV3-52-201ENST00000519770 353 ntBASIC19.73■□□□□ 0.75
USP25Q9UHP3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 AC011498.5-201ENST00000592027 486 ntBASIC19.73■□□□□ 0.75
USP25Q9UHP3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 AL592071.1-201ENST00000611956 408 ntBASIC19.73■□□□□ 0.75
USP25Q9UHP3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 AC078925.2-201ENST00000624013 1973 ntBASIC19.73■□□□□ 0.75
USP25Q9UHP3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
USP25Q9UHP3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP25Q9UHP3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 AL138831.2-201ENST00000606564 490 ntBASIC19.72■□□□□ 0.75
USP25Q9UHP3 AC019129.2-201ENST00000609837 1235 ntBASIC19.72■□□□□ 0.75
USP25Q9UHP3 AC124864.1-201ENST00000623408 392 ntBASIC19.72■□□□□ 0.75
USP25Q9UHP3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP25Q9UHP3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.72■□□□□ 0.75
USP25Q9UHP3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.71■□□□□ 0.75
USP25Q9UHP3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.71■□□□□ 0.75
USP25Q9UHP3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
USP25Q9UHP3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP25Q9UHP3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP25Q9UHP3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms