Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HDAC6Q9UBN7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.43■□□□□ 0.7
HDAC6Q9UBN7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 AD000864.1-201ENST00000624076 2295 ntBASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 AC005829.1-201ENST00000570002 483 ntBASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 AC002310.6-201ENST00000624451 1377 ntBASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.42■□□□□ 0.7
HDAC6Q9UBN7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.41■□□□□ 0.7
HDAC6Q9UBN7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms