Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 PEG13-201ENST00000631594 5667 ntBASIC4.66□□□□□ -1.66
LCE3DQ9BYE3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 AC036111.1-201ENST00000533973 1582 ntBASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 AC009949.1-201ENST00000623048 1830 ntBASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 HOXB1-202ENST00000577092 1414 ntBASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 AL024508.2-201ENST00000607749 1894 ntBASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LCE3DQ9BYE3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 MIR638-201ENST00000385237 100 ntBASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 SLC29A4P1-201ENST00000398760 971 ntBASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AC004980.1-204ENST00000429707 299 ntBASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 FAM207BP-201ENST00000447172 505 ntBASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 KRT16P5-201ENST00000455284 522 ntBASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AC008622.2-201ENST00000617006 1229 ntBASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AC011298.2-201ENST00000617989 482 ntBASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LCE3DQ9BYE3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms