Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 OR7E14P-202ENST00000530490 1290 ntBASIC12.02□□□□□ -0.49
UPK3BQ9BT76 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 MTDHP4-201ENST00000600287 670 ntBASIC12.02□□□□□ -0.49
UPK3BQ9BT76 AC025062.2-201ENST00000605477 670 ntBASIC12.02□□□□□ -0.49
UPK3BQ9BT76 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 AC107918.4-202ENST00000641623 219 ntBASIC12.02□□□□□ -0.49
UPK3BQ9BT76 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.02□□□□□ -0.49
UPK3BQ9BT76 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.02□□□□□ -0.49
UPK3BQ9BT76 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.02□□□□□ -0.49
UPK3BQ9BT76 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.01□□□□□ -0.49
UPK3BQ9BT76 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 HLA-J-201ENST00000462773 1622 ntBASIC12.01□□□□□ -0.49
UPK3BQ9BT76 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.01□□□□□ -0.49
UPK3BQ9BT76 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 AC079776.4-201ENST00000511039 504 ntBASIC12.01□□□□□ -0.49
UPK3BQ9BT76 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 AC139887.3-201ENST00000568585 713 ntBASIC12.01□□□□□ -0.49
UPK3BQ9BT76 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 STK25P1-201ENST00000585406 838 ntBASIC12.01□□□□□ -0.49
UPK3BQ9BT76 MIR7706-201ENST00000613747 67 ntBASIC12.01□□□□□ -0.49
UPK3BQ9BT76 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 AC148477.8-201ENST00000624298 468 ntBASIC12.01□□□□□ -0.49
UPK3BQ9BT76 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
UPK3BQ9BT76 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
UPK3BQ9BT76 AC063926.3-201ENST00000624734 5658 ntBASIC12□□□□□ -0.49
UPK3BQ9BT76 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
UPK3BQ9BT76 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12□□□□□ -0.49
UPK3BQ9BT76 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
UPK3BQ9BT76 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
UPK3BQ9BT76 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
UPK3BQ9BT76 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
UPK3BQ9BT76 AL022342.1-201ENST00000400363 863 ntBASIC12□□□□□ -0.49
UPK3BQ9BT76 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12□□□□□ -0.49
UPK3BQ9BT76 AL590627.1-203ENST00000421194 1026 ntBASIC12□□□□□ -0.49
UPK3BQ9BT76 SIGLEC30P-201ENST00000455569 941 ntBASIC12□□□□□ -0.49
UPK3BQ9BT76 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12□□□□□ -0.49
UPK3BQ9BT76 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12□□□□□ -0.49
UPK3BQ9BT76 AC109462.3-201ENST00000573934 613 ntBASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms