Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AD001527.2-201ENST00000622994 785 ntBASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF4Q9BSR8 AC009336.1-201ENST00000608941 1553 ntBASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 AC114341.1-201ENST00000618070 349 ntBASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
YIPF4Q9BSR8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.21■□□□□ 0.18
YIPF4Q9BSR8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.21■□□□□ 0.18
YIPF4Q9BSR8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.21■□□□□ 0.18
YIPF4Q9BSR8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.21■□□□□ 0.18
YIPF4Q9BSR8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
YIPF4Q9BSR8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
YIPF4Q9BSR8 AL135999.2-201ENST00000622438 1686 ntBASIC16.21■□□□□ 0.18
YIPF4Q9BSR8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
YIPF4Q9BSR8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
YIPF4Q9BSR8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 LINC01711-201ENST00000598340 967 ntBASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 AC079328.2-201ENST00000561241 3354 ntBASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.2■□□□□ 0.18
YIPF4Q9BSR8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms