Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.23■□□□□ 0.19
PTCHD1Q96NR3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 AC006504.4-201ENST00000592118 1568 ntBASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 AC016396.2-201ENST00000562575 1417 ntBASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 AC073621.1-201ENST00000392730 636 ntBASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 KRT18P27-201ENST00000427733 1299 ntBASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 AC098831.1-202ENST00000438821 336 ntBASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 AC136632.2-201ENST00000512891 861 ntBASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 AC005593.1-201ENST00000624894 515 ntBASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 PGM5P2-202ENST00000637225 1043 ntBASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTCHD1Q96NR3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 ELK2BP-201ENST00000415014 1224 ntBASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.21■□□□□ 0.19
PTCHD1Q96NR3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
PTCHD1Q96NR3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTCHD1Q96NR3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PTCHD1Q96NR3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PTCHD1Q96NR3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTCHD1Q96NR3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTCHD1Q96NR3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PTCHD1Q96NR3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.2■□□□□ 0.18
PTCHD1Q96NR3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD1Q96NR3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTCHD1Q96NR3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.2■□□□□ 0.18
PTCHD1Q96NR3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD1Q96NR3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PTCHD1Q96NR3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD1Q96NR3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD1Q96NR3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTCHD1Q96NR3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms