Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
FGD4Q96M96 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
FGD4Q96M96 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.37■□□□□ 0.69
FGD4Q96M96 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.36■□□□□ 0.69
FGD4Q96M96 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FGD4Q96M96 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.36■□□□□ 0.69
FGD4Q96M96 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FGD4Q96M96 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
FGD4Q96M96 AC090340.1-201ENST00000620778 4980 ntBASIC19.36■□□□□ 0.69
FGD4Q96M96 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FGD4Q96M96 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FGD4Q96M96 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
FGD4Q96M96 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FGD4Q96M96 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
FGD4Q96M96 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FGD4Q96M96 HMGA1P7-201ENST00000406908 502 ntBASIC19.36■□□□□ 0.69
FGD4Q96M96 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.36■□□□□ 0.69
FGD4Q96M96 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FGD4Q96M96 AL671277.1-201ENST00000429656 993 ntBASIC19.36■□□□□ 0.69
FGD4Q96M96 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FGD4Q96M96 BCRP1-201ENST00000444246 691 ntBASIC19.36■□□□□ 0.69
FGD4Q96M96 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.36■□□□□ 0.69
FGD4Q96M96 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FGD4Q96M96 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.36■□□□□ 0.69
FGD4Q96M96 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.36■□□□□ 0.69
FGD4Q96M96 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
FGD4Q96M96 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FGD4Q96M96 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
FGD4Q96M96 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.36■□□□□ 0.69
FGD4Q96M96 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
FGD4Q96M96 AC243562.1-201ENST00000560672 389 ntBASIC19.36■□□□□ 0.69
FGD4Q96M96 AC005498.2-205ENST00000593218 784 ntBASIC19.36■□□□□ 0.69
FGD4Q96M96 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
FGD4Q96M96 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FGD4Q96M96 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.36■□□□□ 0.69
FGD4Q96M96 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FGD4Q96M96 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FGD4Q96M96 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FGD4Q96M96 AC135050.7-201ENST00000624508 2218 ntBASIC19.36■□□□□ 0.69
FGD4Q96M96 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.36■□□□□ 0.69
FGD4Q96M96 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FGD4Q96M96 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FGD4Q96M96 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.36■□□□□ 0.69
FGD4Q96M96 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
FGD4Q96M96 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.35■□□□□ 0.69
FGD4Q96M96 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.35■□□□□ 0.69
FGD4Q96M96 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 AC020916.1-201ENST00000587762 1774 ntBASIC19.35■□□□□ 0.69
FGD4Q96M96 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.35■□□□□ 0.69
FGD4Q96M96 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
FGD4Q96M96 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.35■□□□□ 0.69
FGD4Q96M96 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.35■□□□□ 0.69
FGD4Q96M96 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.35■□□□□ 0.69
FGD4Q96M96 MIR4515-201ENST00000584082 81 ntBASIC19.35■□□□□ 0.69
FGD4Q96M96 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.35■□□□□ 0.69
FGD4Q96M96 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 AL390955.2-201ENST00000603032 514 ntBASIC19.35■□□□□ 0.69
FGD4Q96M96 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.35■□□□□ 0.69
FGD4Q96M96 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FGD4Q96M96 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.35■□□□□ 0.69
FGD4Q96M96 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
FGD4Q96M96 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
FGD4Q96M96 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
FGD4Q96M96 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
FGD4Q96M96 SLC25A1P3-201ENST00000395415 828 ntBASIC19.34■□□□□ 0.69
FGD4Q96M96 FAM58DP-201ENST00000428076 619 ntBASIC19.34■□□□□ 0.69
FGD4Q96M96 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
FGD4Q96M96 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.34■□□□□ 0.69
FGD4Q96M96 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.34■□□□□ 0.69
FGD4Q96M96 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.34■□□□□ 0.69
FGD4Q96M96 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FGD4Q96M96 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
FGD4Q96M96 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
FGD4Q96M96 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms