Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 TSPY22P-201ENST00000427496 604 ntBASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 TSSC2-201ENST00000450217 709 ntBASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB40AQ8WXH6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 CYP2T1P-202ENST00000641596 2535 ntBASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 AC016734.2-201ENST00000624325 1377 ntBASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 AC006449.5-201ENST00000610658 2098 ntBASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 AC046185.3-201ENST00000623228 1824 ntBASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RAB40AQ8WXH6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 AC113404.2-201ENST00000507884 177 ntBASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 RNF126P1-202ENST00000569893 925 ntBASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 AC005332.3-201ENST00000589904 676 ntBASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 AC008894.3-201ENST00000624324 3103 ntBASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms