Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
U2AF1L4Q8WU68 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
U2AF1L4Q8WU68 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
U2AF1L4Q8WU68 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
U2AF1L4Q8WU68 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
U2AF1L4Q8WU68 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.64■□□□□ 0.74
U2AF1L4Q8WU68 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
U2AF1L4Q8WU68 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.64■□□□□ 0.74
U2AF1L4Q8WU68 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 AC003669.1-201ENST00000334569 611 ntBASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 AL008721.1-201ENST00000609964 604 ntBASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
U2AF1L4Q8WU68 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 CXCL1P1-201ENST00000502804 216 ntBASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.63■□□□□ 0.73
U2AF1L4Q8WU68 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 AC092919.2-201ENST00000623631 1645 ntBASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 AC006116.8-202ENST00000587620 1550 ntBASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 ADH5P3-201ENST00000433842 1137 ntBASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 CNN2P2-201ENST00000443536 909 ntBASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 CNN2P3-201ENST00000450201 906 ntBASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 TIMM8BP1-201ENST00000452384 211 ntBASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 AL136317.3-201ENST00000618497 906 ntBASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 AL096828.2-201ENST00000567259 1965 ntBASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2AF1L4Q8WU68 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms