Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 KRT18P27-201ENST00000427733 1299 ntBASIC18.2■□□□□ 0.5
UBA3Q8TBC4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 AC092910.1-201ENST00000482027 1129 ntBASIC18.2■□□□□ 0.5
UBA3Q8TBC4 AC105339.3-201ENST00000560043 636 ntBASIC18.2■□□□□ 0.5
UBA3Q8TBC4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
UBA3Q8TBC4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 AC116407.3-201ENST00000623905 1129 ntBASIC18.19■□□□□ 0.5
UBA3Q8TBC4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.19■□□□□ 0.5
UBA3Q8TBC4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBA3Q8TBC4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 GPR89P-201ENST00000407924 1495 ntBASIC18.18■□□□□ 0.5
UBA3Q8TBC4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 AC060834.1-201ENST00000443027 2032 ntBASIC18.18■□□□□ 0.5
UBA3Q8TBC4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
UBA3Q8TBC4 AC243591.1-201ENST00000452967 1364 ntBASIC18.17■□□□□ 0.5
UBA3Q8TBC4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UBA3Q8TBC4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms