Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 AC069152.1-201ENST00000438030 544 ntBASIC12.89□□□□□ -0.35
NUP35Q8NFH5 KRT18P65-201ENST00000439811 1286 ntBASIC12.89□□□□□ -0.35
NUP35Q8NFH5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 AC073195.1-201ENST00000607241 877 ntBASIC12.89□□□□□ -0.35
NUP35Q8NFH5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 ALOX12P2-203ENST00000570921 1945 ntBASIC12.89□□□□□ -0.35
NUP35Q8NFH5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.89□□□□□ -0.35
NUP35Q8NFH5 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.88□□□□□ -0.35
NUP35Q8NFH5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NUP35Q8NFH5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NUP35Q8NFH5 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
NUP35Q8NFH5 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NUP35Q8NFH5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.87□□□□□ -0.35
NUP35Q8NFH5 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NUP35Q8NFH5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NUP35Q8NFH5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms