Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC4A11Q8NBS3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 RNA5SP415-201ENST00000517246 115 ntBASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 UNC93B6-202ENST00000528242 690 ntBASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 AF228730.7-201ENST00000641842 219 ntBASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 IL9RP2-201ENST00000423948 1312 ntBASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC4A11Q8NBS3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 PRORSD1P-202ENST00000563365 2154 ntBASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 AC087163.2-201ENST00000457299 853 ntBASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC4A11Q8NBS3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SLC4A11Q8NBS3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC4A11Q8NBS3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
SLC4A11Q8NBS3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC4A11Q8NBS3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC4A11Q8NBS3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms