Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 AC007967.2-201ENST00000432613 625 ntBASIC17.54■□□□□ 0.4
KDM1BQ8NB78 HCG4B-203ENST00000450128 991 ntBASIC17.54■□□□□ 0.4
KDM1BQ8NB78 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 AC002347.1-201ENST00000569543 541 ntBASIC17.54■□□□□ 0.4
KDM1BQ8NB78 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 AC004790.2-201ENST00000623588 572 ntBASIC17.54■□□□□ 0.4
KDM1BQ8NB78 AC090340.1-201ENST00000620778 4980 ntBASIC17.54■□□□□ 0.4
KDM1BQ8NB78 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KDM1BQ8NB78 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 MIR4751-201ENST00000578027 74 ntBASIC17.53■□□□□ 0.4
KDM1BQ8NB78 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 AC139530.3-201ENST00000620344 690 ntBASIC17.53■□□□□ 0.4
KDM1BQ8NB78 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KDM1BQ8NB78 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 CROCCP2-202ENST00000412962 2773 ntBASIC17.52■□□□□ 0.4
KDM1BQ8NB78 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KDM1BQ8NB78 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.39
KDM1BQ8NB78 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
KDM1BQ8NB78 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
KDM1BQ8NB78 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms