Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PAF1Q8N7H5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PAF1Q8N7H5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 AKR1C7P-201ENST00000305623 895 ntBASIC17.7■□□□□ 0.42
PAF1Q8N7H5 AC003669.1-201ENST00000334569 611 ntBASIC17.7■□□□□ 0.42
PAF1Q8N7H5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 AF238378.1-201ENST00000526806 358 ntBASIC17.7■□□□□ 0.42
PAF1Q8N7H5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 AL121912.1-201ENST00000603683 238 ntBASIC17.7■□□□□ 0.42
PAF1Q8N7H5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.7■□□□□ 0.42
PAF1Q8N7H5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 AL356309.3-201ENST00000624132 1934 ntBASIC17.7■□□□□ 0.42
PAF1Q8N7H5 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PAF1Q8N7H5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.69■□□□□ 0.42
PAF1Q8N7H5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 AL355877.3-201ENST00000622820 899 ntBASIC17.69■□□□□ 0.42
PAF1Q8N7H5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PAF1Q8N7H5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 AC068880.1-201ENST00000507289 2297 ntBASIC17.68■□□□□ 0.42
PAF1Q8N7H5 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 AC079781.3-201ENST00000449110 356 ntBASIC17.68■□□□□ 0.42
PAF1Q8N7H5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 AF186996.4-201ENST00000467186 377 ntBASIC17.68■□□□□ 0.42
PAF1Q8N7H5 BX005266.1-201ENST00000473402 457 ntBASIC17.68■□□□□ 0.42
PAF1Q8N7H5 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.68■□□□□ 0.42
PAF1Q8N7H5 AL031008.1-201ENST00000619963 541 ntBASIC17.68■□□□□ 0.42
PAF1Q8N7H5 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms