Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 AC046185.3-201ENST00000623228 1824 ntBASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 KRT18P55-202ENST00000578578 1546 ntBASIC17.42■□□□□ 0.38
SYNPOQ8N3V7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 AC005237.2-201ENST00000434368 219 ntBASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 CNN2P2-201ENST00000443536 909 ntBASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 CNN2P3-201ENST00000450201 906 ntBASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 AC190387.1-201ENST00000551683 408 ntBASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 AC093520.2-201ENST00000561830 333 ntBASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 AC138761.1-201ENST00000584393 385 ntBASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 AL136317.3-201ENST00000618497 906 ntBASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 AL135999.2-201ENST00000622438 1686 ntBASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SYNPOQ8N3V7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 PMS2P4-201ENST00000412466 1052 ntBASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 AC244107.1-201ENST00000442033 332 ntBASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 AC087163.2-201ENST00000457299 853 ntBASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 AC069335.1-201ENST00000489972 472 ntBASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 SLC25A6P2-201ENST00000497974 877 ntBASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SYNPOQ8N3V7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms