Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 PRYP6-201ENST00000514804 343 ntBASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 RARRES2P9-201ENST00000565168 469 ntBASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL27A1Q8IZC6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
COL27A1Q8IZC6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
COL27A1Q8IZC6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 TOP3BP1-201ENST00000420768 1380 ntBASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 AC244107.1-201ENST00000442033 332 ntBASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 AC093525.9-201ENST00000624961 1746 ntBASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 AC027369.6-201ENST00000525520 931 ntBASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
COL27A1Q8IZC6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 AL138688.1-201ENST00000624851 1594 ntBASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 KRT8P49-201ENST00000604166 1432 ntBASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 OR8S1-201ENST00000310194 1080 ntBASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 SPTLC1P1-201ENST00000447199 261 ntBASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 AL132655.2-201ENST00000596276 594 ntBASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 AC008738.7-201ENST00000609744 511 ntBASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 AC009118.2-201ENST00000613275 655 ntBASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL27A1Q8IZC6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms