Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLX4Q8IY92 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLX4Q8IY92 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLX4Q8IY92 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLX4Q8IY92 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
SLX4Q8IY92 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.65■□□□□ 0.9
SLX4Q8IY92 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.9
SLX4Q8IY92 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SLX4Q8IY92 AL080243.2-201ENST00000418783 582 ntBASIC20.64■□□□□ 0.9
SLX4Q8IY92 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.64■□□□□ 0.9
SLX4Q8IY92 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.64■□□□□ 0.9
SLX4Q8IY92 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SLX4Q8IY92 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.64■□□□□ 0.9
SLX4Q8IY92 AC090164.3-201ENST00000610780 2143 ntBASIC20.64■□□□□ 0.9
SLX4Q8IY92 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.9
SLX4Q8IY92 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SLX4Q8IY92 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SLX4Q8IY92 EGFEM1P-202ENST00000431685 1563 ntBASIC20.64■□□□□ 0.9
SLX4Q8IY92 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.64■□□□□ 0.9
SLX4Q8IY92 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLX4Q8IY92 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLX4Q8IY92 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLX4Q8IY92 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLX4Q8IY92 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SLX4Q8IY92 FAM220BP-201ENST00000377689 816 ntBASIC20.64■□□□□ 0.89
SLX4Q8IY92 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.64■□□□□ 0.89
SLX4Q8IY92 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.64■□□□□ 0.89
SLX4Q8IY92 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLX4Q8IY92 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
SLX4Q8IY92 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLX4Q8IY92 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLX4Q8IY92 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLX4Q8IY92 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.64■□□□□ 0.89
SLX4Q8IY92 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.63■□□□□ 0.89
SLX4Q8IY92 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLX4Q8IY92 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.63■□□□□ 0.89
SLX4Q8IY92 LINC00896-202ENST00000609602 2128 ntBASIC20.63■□□□□ 0.89
SLX4Q8IY92 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.63■□□□□ 0.89
SLX4Q8IY92 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLX4Q8IY92 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.63■□□□□ 0.89
SLX4Q8IY92 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLX4Q8IY92 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLX4Q8IY92 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLX4Q8IY92 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.63■□□□□ 0.89
SLX4Q8IY92 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SLX4Q8IY92 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.63■□□□□ 0.89
SLX4Q8IY92 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.63■□□□□ 0.89
SLX4Q8IY92 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLX4Q8IY92 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLX4Q8IY92 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLX4Q8IY92 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLX4Q8IY92 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLX4Q8IY92 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLX4Q8IY92 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.63■□□□□ 0.89
SLX4Q8IY92 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLX4Q8IY92 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLX4Q8IY92 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.62■□□□□ 0.89
SLX4Q8IY92 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 HLA-V-204ENST00000476601 1289 ntBASIC20.62■□□□□ 0.89
SLX4Q8IY92 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLX4Q8IY92 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLX4Q8IY92 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLX4Q8IY92 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLX4Q8IY92 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLX4Q8IY92 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLX4Q8IY92 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 PRYP6-201ENST00000514804 343 ntBASIC20.62■□□□□ 0.89
SLX4Q8IY92 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 CYP2A7P1-201ENST00000595391 815 ntBASIC20.62■□□□□ 0.89
SLX4Q8IY92 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SLX4Q8IY92 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.62■□□□□ 0.89
SLX4Q8IY92 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLX4Q8IY92 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLX4Q8IY92 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLX4Q8IY92 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SLX4Q8IY92 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SLX4Q8IY92 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLX4Q8IY92 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.61■□□□□ 0.89
SLX4Q8IY92 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SLX4Q8IY92 AC138969.3-201ENST00000546612 1459 ntBASIC20.61■□□□□ 0.89
SLX4Q8IY92 AC138932.2-201ENST00000548268 1459 ntBASIC20.61■□□□□ 0.89
SLX4Q8IY92 AC126755.4-201ENST00000549796 1459 ntBASIC20.61■□□□□ 0.89
SLX4Q8IY92 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLX4Q8IY92 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms