Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 AC140878.1-201ENST00000565277 250 ntBASIC18.54■□□□□ 0.56
HERC6Q8IVU3 RARRES2P8-201ENST00000566335 367 ntBASIC18.54■□□□□ 0.56
HERC6Q8IVU3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.54■□□□□ 0.56
HERC6Q8IVU3 AKAP8P1-201ENST00000434743 1349 ntBASIC18.53■□□□□ 0.56
HERC6Q8IVU3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 TREML5P-201ENST00000421694 576 ntBASIC18.53■□□□□ 0.56
HERC6Q8IVU3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 SLC25A39P2-201ENST00000537614 270 ntBASIC18.53■□□□□ 0.56
HERC6Q8IVU3 DUX4L17-201ENST00000557360 1267 ntBASIC18.53■□□□□ 0.56
HERC6Q8IVU3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 AL135999.2-201ENST00000622438 1686 ntBASIC18.53■□□□□ 0.56
HERC6Q8IVU3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HERC6Q8IVU3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 AC135050.7-201ENST00000624508 2218 ntBASIC18.52■□□□□ 0.56
HERC6Q8IVU3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 SPCS2P4-201ENST00000436160 681 ntBASIC18.52■□□□□ 0.56
HERC6Q8IVU3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 AL390754.1-201ENST00000619088 582 ntBASIC18.52■□□□□ 0.56
HERC6Q8IVU3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HERC6Q8IVU3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HERC6Q8IVU3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HERC6Q8IVU3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HERC6Q8IVU3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HERC6Q8IVU3 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.52■□□□□ 0.55
HERC6Q8IVU3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
HERC6Q8IVU3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC6Q8IVU3 AC135776.1-201ENST00000319817 2481 ntBASIC18.51■□□□□ 0.55
HERC6Q8IVU3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HERC6Q8IVU3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC6Q8IVU3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.51■□□□□ 0.55
HERC6Q8IVU3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HERC6Q8IVU3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.51■□□□□ 0.55
HERC6Q8IVU3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
HERC6Q8IVU3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HERC6Q8IVU3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.51■□□□□ 0.55
HERC6Q8IVU3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms