Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 NUS1P2-201ENST00000417358 873 ntBASIC15.91■□□□□ 0.14
VRK2Q86Y07 POM121L3P-201ENST00000419331 1163 ntBASIC15.91■□□□□ 0.14
VRK2Q86Y07 ATP5G2P1-201ENST00000433580 426 ntBASIC15.91■□□□□ 0.14
VRK2Q86Y07 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 AC091076.1-201ENST00000610741 619 ntBASIC15.91■□□□□ 0.14
VRK2Q86Y07 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 AC093458.2-201ENST00000623150 629 ntBASIC15.91■□□□□ 0.14
VRK2Q86Y07 AP000867.4-201ENST00000641616 219 ntBASIC15.91■□□□□ 0.14
VRK2Q86Y07 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 CROCCP1-201ENST00000426910 5675 ntBASIC15.91■□□□□ 0.14
VRK2Q86Y07 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 AL118508.1-201ENST00000613502 2345 ntBASIC15.91■□□□□ 0.14
VRK2Q86Y07 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VRK2Q86Y07 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
VRK2Q86Y07 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 FRMD8P1-201ENST00000440433 1524 ntBASIC15.9■□□□□ 0.14
VRK2Q86Y07 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 GPR89P-201ENST00000407924 1495 ntBASIC15.9■□□□□ 0.14
VRK2Q86Y07 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.9■□□□□ 0.14
VRK2Q86Y07 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VRK2Q86Y07 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.14
VRK2Q86Y07 AC078925.2-201ENST00000624013 1973 ntBASIC15.89■□□□□ 0.13
VRK2Q86Y07 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK2Q86Y07 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
VRK2Q86Y07 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.89■□□□□ 0.13
VRK2Q86Y07 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK2Q86Y07 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.89■□□□□ 0.13
VRK2Q86Y07 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK2Q86Y07 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VRK2Q86Y07 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
VRK2Q86Y07 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
VRK2Q86Y07 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.89■□□□□ 0.13
VRK2Q86Y07 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VRK2Q86Y07 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VRK2Q86Y07 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.89■□□□□ 0.13
VRK2Q86Y07 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.89■□□□□ 0.13
VRK2Q86Y07 AL020989.1-201ENST00000422979 469 ntBASIC15.89■□□□□ 0.13
VRK2Q86Y07 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
VRK2Q86Y07 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms