Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VPS13CQ709C8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.15□□□□□ -0.14
VPS13CQ709C8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS13CQ709C8 AC104794.3-201ENST00000566840 1248 ntBASIC14.15□□□□□ -0.14
VPS13CQ709C8 MIR6787-201ENST00000616675 61 ntBASIC14.15□□□□□ -0.14
VPS13CQ709C8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.15□□□□□ -0.14
VPS13CQ709C8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.15□□□□□ -0.14
VPS13CQ709C8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
VPS13CQ709C8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13CQ709C8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 SPDYE12P-201ENST00000618416 771 ntBASIC14.14□□□□□ -0.15
VPS13CQ709C8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13CQ709C8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13CQ709C8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13CQ709C8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13CQ709C8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 AC112492.5-201ENST00000421897 457 ntBASIC14.14□□□□□ -0.15
VPS13CQ709C8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 AC132938.2-201ENST00000579188 680 ntBASIC14.14□□□□□ -0.15
VPS13CQ709C8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 AL591163.1-201ENST00000641757 987 ntBASIC14.14□□□□□ -0.15
VPS13CQ709C8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 AC046185.3-201ENST00000623228 1824 ntBASIC14.14□□□□□ -0.15
VPS13CQ709C8 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.14□□□□□ -0.15
VPS13CQ709C8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13CQ709C8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 SPDYE18-201ENST00000510091 1050 ntBASIC14.14□□□□□ -0.15
VPS13CQ709C8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13CQ709C8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13CQ709C8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13CQ709C8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13CQ709C8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13CQ709C8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13CQ709C8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS13CQ709C8 AC027369.6-201ENST00000525520 931 ntBASIC14.13□□□□□ -0.15
VPS13CQ709C8 MIR6080-201ENST00000617359 66 ntBASIC14.13□□□□□ -0.15
VPS13CQ709C8 AL161645.1-201ENST00000622716 1255 ntBASIC14.13□□□□□ -0.15
VPS13CQ709C8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13CQ709C8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS13CQ709C8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
VPS13CQ709C8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13CQ709C8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13CQ709C8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13CQ709C8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VPS13CQ709C8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
VPS13CQ709C8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.13□□□□□ -0.15
VPS13CQ709C8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.13□□□□□ -0.15
VPS13CQ709C8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13CQ709C8 AC099568.2-201ENST00000609194 695 ntBASIC14.13□□□□□ -0.15
VPS13CQ709C8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.13□□□□□ -0.15
VPS13CQ709C8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS13CQ709C8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS13CQ709C8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS13CQ709C8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13CQ709C8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13CQ709C8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS13CQ709C8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13CQ709C8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13CQ709C8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.13□□□□□ -0.15
VPS13CQ709C8 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS13CQ709C8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13CQ709C8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 AL138918.1-201ENST00000568306 659 ntBASIC14.12□□□□□ -0.15
VPS13CQ709C8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms