Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RTL6Q6ICC9 AC012317.2-201ENST00000623305 2251 ntBASIC15.54■□□□□ 0.08
RTL6Q6ICC9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 KRT18P55-202ENST00000578578 1546 ntBASIC15.53■□□□□ 0.08
RTL6Q6ICC9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 AC097637.2-201ENST00000624096 1997 ntBASIC15.53■□□□□ 0.08
RTL6Q6ICC9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 CRYGEP-201ENST00000412192 528 ntBASIC15.53■□□□□ 0.08
RTL6Q6ICC9 VN2R19P-201ENST00000442399 1052 ntBASIC15.53■□□□□ 0.08
RTL6Q6ICC9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 CROCCP1-201ENST00000426910 5675 ntBASIC15.53■□□□□ 0.08
RTL6Q6ICC9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RTL6Q6ICC9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.52■□□□□ 0.08
RTL6Q6ICC9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.52■□□□□ 0.08
RTL6Q6ICC9 HCG4B-203ENST00000450128 991 ntBASIC15.52■□□□□ 0.08
RTL6Q6ICC9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 MIR4751-201ENST00000578027 74 ntBASIC15.52■□□□□ 0.08
RTL6Q6ICC9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 MTDHP5-201ENST00000598980 586 ntBASIC15.52■□□□□ 0.08
RTL6Q6ICC9 AL353135.1-201ENST00000606729 504 ntBASIC15.52■□□□□ 0.08
RTL6Q6ICC9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 AC092865.6-201ENST00000642101 219 ntBASIC15.52■□□□□ 0.08
RTL6Q6ICC9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RTL6Q6ICC9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RTL6Q6ICC9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
RTL6Q6ICC9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms