Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF43Q68DV7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF43Q68DV7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF43Q68DV7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF43Q68DV7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RNF43Q68DV7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RNF43Q68DV7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RNF43Q68DV7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF43Q68DV7 RPS8P6-201ENST00000426177 609 ntBASIC18.06■□□□□ 0.48
RNF43Q68DV7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF43Q68DV7 PGAM5P1-201ENST00000518923 814 ntBASIC18.06■□□□□ 0.48
RNF43Q68DV7 AC010327.4-202ENST00000591484 748 ntBASIC18.06■□□□□ 0.48
RNF43Q68DV7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RNF43Q68DV7 AC073592.5-201ENST00000624854 528 ntBASIC18.06■□□□□ 0.48
RNF43Q68DV7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RNF43Q68DV7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF43Q68DV7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF43Q68DV7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF43Q68DV7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF43Q68DV7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF43Q68DV7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF43Q68DV7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF43Q68DV7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF43Q68DV7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF43Q68DV7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RNF43Q68DV7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF43Q68DV7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF43Q68DV7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RNF43Q68DV7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF43Q68DV7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF43Q68DV7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF43Q68DV7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF43Q68DV7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF43Q68DV7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF43Q68DV7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF43Q68DV7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF43Q68DV7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF43Q68DV7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF43Q68DV7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF43Q68DV7 AP001160.2-201ENST00000596071 487 ntBASIC18.05■□□□□ 0.48
RNF43Q68DV7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF43Q68DV7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF43Q68DV7 AC107918.4-202ENST00000641623 219 ntBASIC18.05■□□□□ 0.48
RNF43Q68DV7 AC079781.4-201ENST00000641908 219 ntBASIC18.05■□□□□ 0.48
RNF43Q68DV7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF43Q68DV7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.05■□□□□ 0.48
RNF43Q68DV7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF43Q68DV7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.05■□□□□ 0.48
RNF43Q68DV7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF43Q68DV7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF43Q68DV7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF43Q68DV7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RNF43Q68DV7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF43Q68DV7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF43Q68DV7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF43Q68DV7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF43Q68DV7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF43Q68DV7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF43Q68DV7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF43Q68DV7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF43Q68DV7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RNF43Q68DV7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.04■□□□□ 0.48
RNF43Q68DV7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.04■□□□□ 0.48
RNF43Q68DV7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF43Q68DV7 MED15P5-201ENST00000423150 992 ntBASIC18.04■□□□□ 0.48
RNF43Q68DV7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF43Q68DV7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RNF43Q68DV7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF43Q68DV7 STK25P1-201ENST00000585406 838 ntBASIC18.04■□□□□ 0.48
RNF43Q68DV7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF43Q68DV7 MTDHP4-201ENST00000600287 670 ntBASIC18.04■□□□□ 0.48
RNF43Q68DV7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF43Q68DV7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF43Q68DV7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF43Q68DV7 AL022326.1-202ENST00000641533 845 ntBASIC18.04■□□□□ 0.48
RNF43Q68DV7 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.04■□□□□ 0.48
RNF43Q68DV7 AC104109.2-201ENST00000602919 1418 ntBASIC18.04■□□□□ 0.48
RNF43Q68DV7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF43Q68DV7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF43Q68DV7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF43Q68DV7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF43Q68DV7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RNF43Q68DV7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF43Q68DV7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF43Q68DV7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.03■□□□□ 0.48
RNF43Q68DV7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF43Q68DV7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF43Q68DV7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF43Q68DV7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms