Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 CLDN5-201ENST00000403084 2357 ntBASIC16.49■□□□□ 0.23
RIF1Q5UIP0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 RNU1-129P-201ENST00000384064 167 ntBASIC16.49■□□□□ 0.23
RIF1Q5UIP0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 KRT8P13-201ENST00000463294 1010 ntBASIC16.49■□□□□ 0.23
RIF1Q5UIP0 AC105233.2-201ENST00000523697 349 ntBASIC16.49■□□□□ 0.23
RIF1Q5UIP0 AF228730.5-201ENST00000530288 346 ntBASIC16.49■□□□□ 0.23
RIF1Q5UIP0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 U1.21-201ENST00000580816 167 ntBASIC16.49■□□□□ 0.23
RIF1Q5UIP0 AC243960.2-201ENST00000600996 747 ntBASIC16.49■□□□□ 0.23
RIF1Q5UIP0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RIF1Q5UIP0 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 RPL37AP1-201ENST00000412502 279 ntBASIC16.48■□□□□ 0.23
RIF1Q5UIP0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 RPL7P3-201ENST00000441388 714 ntBASIC16.48■□□□□ 0.23
RIF1Q5UIP0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 AL589739.1-201ENST00000607720 493 ntBASIC16.48■□□□□ 0.23
RIF1Q5UIP0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 AC016027.1-202ENST00000607927 1699 ntBASIC16.48■□□□□ 0.23
RIF1Q5UIP0 AL135999.2-201ENST00000622438 1686 ntBASIC16.48■□□□□ 0.23
RIF1Q5UIP0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 CTBP2P5-201ENST00000454986 1264 ntBASIC16.48■□□□□ 0.23
RIF1Q5UIP0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 AC005412.3-201ENST00000580309 715 ntBASIC16.48■□□□□ 0.23
RIF1Q5UIP0 AC004790.1-201ENST00000612686 536 ntBASIC16.48■□□□□ 0.23
RIF1Q5UIP0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RIF1Q5UIP0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 FO681548.1-201ENST00000455617 1132 ntBASIC16.47■□□□□ 0.23
RIF1Q5UIP0 AC108725.1-201ENST00000495472 409 ntBASIC16.47■□□□□ 0.23
RIF1Q5UIP0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.47■□□□□ 0.23
RIF1Q5UIP0 RARRES2P9-201ENST00000565168 469 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms