Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATPAF1Q5TC12 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 AC011840.4-201ENST00000578471 627 ntBASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 AC116407.2-201ENST00000613639 860 ntBASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 LINC02199-201ENST00000506655 2702 ntBASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATPAF1Q5TC12 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ATPAF1Q5TC12 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
ATPAF1Q5TC12 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.96□□□□□ -0.02
ATPAF1Q5TC12 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
ATPAF1Q5TC12 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
ATPAF1Q5TC12 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
ATPAF1Q5TC12 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.96□□□□□ -0.02
ATPAF1Q5TC12 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.96□□□□□ -0.02
ATPAF1Q5TC12 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ATPAF1Q5TC12 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 AC097374.2-201ENST00000618617 1306 ntBASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 AP002383.4-201ENST00000442518 975 ntBASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 NPAP1P7-201ENST00000613027 823 ntBASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 LINC01451-201ENST00000623792 534 ntBASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 PCDHA1-201ENST00000378133 2726 ntBASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ATPAF1Q5TC12 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 KRT18P1-202ENST00000452408 1331 ntBASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
ATPAF1Q5TC12 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms