Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNFT1Q5M7Z0 AL121761.2-201ENST00000598007 1648 ntBASIC15.41■□□□□ 0.06
RNFT1Q5M7Z0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RNFT1Q5M7Z0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNFT1Q5M7Z0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.41■□□□□ 0.06
RNFT1Q5M7Z0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.41■□□□□ 0.06
RNFT1Q5M7Z0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.41■□□□□ 0.06
RNFT1Q5M7Z0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNFT1Q5M7Z0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.41■□□□□ 0.06
RNFT1Q5M7Z0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNFT1Q5M7Z0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.41■□□□□ 0.06
RNFT1Q5M7Z0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNFT1Q5M7Z0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 AL645939.2-201ENST00000427340 991 ntBASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 AC112191.1-201ENST00000523689 701 ntBASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 AC099522.2-201ENST00000607001 744 ntBASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.4■□□□□ 0.06
RNFT1Q5M7Z0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 SLC25A1P3-201ENST00000395415 828 ntBASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 TSEN15P1-201ENST00000423257 515 ntBASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 AC140658.5-201ENST00000438532 169 ntBASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 AC004835.2-201ENST00000603762 682 ntBASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 AL645728.2-201ENST00000641974 660 ntBASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 AC134043.2-201ENST00000624206 2238 ntBASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNFT1Q5M7Z0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
RNFT1Q5M7Z0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNFT1Q5M7Z0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RNFT1Q5M7Z0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNFT1Q5M7Z0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNFT1Q5M7Z0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNFT1Q5M7Z0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms