Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.9■□□□□ 0.94
TNNI3KQ59H18 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNNI3KQ59H18 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.9■□□□□ 0.94
TNNI3KQ59H18 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TNNI3KQ59H18 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNNI3KQ59H18 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNNI3KQ59H18 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.9■□□□□ 0.94
TNNI3KQ59H18 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
TNNI3KQ59H18 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TNNI3KQ59H18 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TNNI3KQ59H18 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TNNI3KQ59H18 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TNNI3KQ59H18 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 AC129492.6-201ENST00000611383 1305 ntBASIC20.89■□□□□ 0.93
TNNI3KQ59H18 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 RHOQP3-201ENST00000437982 621 ntBASIC20.89■□□□□ 0.93
TNNI3KQ59H18 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 AP001094.4-201ENST00000579008 2176 ntBASIC20.89■□□□□ 0.93
TNNI3KQ59H18 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TNNI3KQ59H18 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 AC106820.2-201ENST00000563775 3264 ntBASIC20.88■□□□□ 0.93
TNNI3KQ59H18 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.88■□□□□ 0.93
TNNI3KQ59H18 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 AC092068.3-201ENST00000587894 2016 ntBASIC20.87■□□□□ 0.93
TNNI3KQ59H18 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.87■□□□□ 0.93
TNNI3KQ59H18 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 AC092865.6-201ENST00000642101 219 ntBASIC20.87■□□□□ 0.93
TNNI3KQ59H18 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 AC060834.1-201ENST00000443027 2032 ntBASIC20.87■□□□□ 0.93
TNNI3KQ59H18 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNNI3KQ59H18 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNNI3KQ59H18 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TNNI3KQ59H18 AC026471.1-201ENST00000564629 3026 ntBASIC20.86■□□□□ 0.93
TNNI3KQ59H18 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TNNI3KQ59H18 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.86■□□□□ 0.93
TNNI3KQ59H18 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNNI3KQ59H18 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms